RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ESPNLQ6ZVH7 1005 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 GRINAQ7Z429 371 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF808Q8N4W9 903 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 NFKBIDQ8NI38 313 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 SLC25A43Q8WUT9 341 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 RND1Q92730 232 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 MAL2Q969L2 176 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 CCDC120Q96HB5 630 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 LRGUKQ96M69 825 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF570Q96NI8 536 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 PKP2Q99959 881 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 TRIM15Q9C019 465 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 SERINC1Q9NRX5 453 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 CCM2LQ9NUG4 571 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 DNAJB12Q9NXW2 375 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 AP4S1Q9Y587 144 aa12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 GCN1Q92616 2671 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-209ENST00000560448 CYP7B1O75881 506 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 STAMBPO95630 424 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 NTN1O95631 604 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 IFNA14P01570 189 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ACADSP16219 412 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 APOBEC1P41238 236 aaKnown RBP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 CLDN18P56856 261 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 QPRTQ15274 297 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 TAF11Q15544 211 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ACSF3Q4G176 576 aaPredicted RBP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 RIPPLY2Q5TAB7 128 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 C3orf33Q6P1S2 294 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ADGRE4PQ86SQ3 457 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 CALHM3Q86XJ0 350 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 PTOV1Q86YD1 416 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF563Q8TA94 476 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ASB5Q8WWX0 329 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 TTYH2Q9BSA4 534 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ACER3Q9NUN7 267 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ARMC1Q9NVT9 282 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 KLHL28Q9NXS3 571 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 SH3BGRL2Q9UJC5 107 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 CAMK2AQ9UQM7 478 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF337Q9Y3M9 751 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 RELNP78509 3460 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 MYO18BQ8IUG5 2567 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 C17orf51A8MQB3 221 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 FAM220BPB1ANY3 271 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 H3BML4 177 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 FCGR2AP12318 317 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 GGT1P19440 569 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 PEX2P28328 305 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 CLK1P49759 484 aaKnown RBP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 COPZ1P61923 177 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 SRSF1Q07955 248 aaKnown RBP eCLIP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 EPS8Q12929 822 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 FOXF1Q12946 379 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 RPS26P11Q5JNZ5 115 aaPredicted RBP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF836Q6ZNA1 936 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ZZZ3Q8IYH5 903 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ADGRG5Q8IZF4 528 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 C10orf111Q8N326 155 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 TNIP2Q8NFZ5 429 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 OR5M9Q8NGP3 310 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 CANT1Q8WVQ1 401 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 WNT2BQ93097 391 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF184Q99676 751 aaPredicted RBP12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 TM9SF2Q99805 663 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 PINK1Q9BXM7 581 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 TIGARQ9NQ88 270 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 SLC13A4Q9UKG4 626 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 ZNF175Q9Y473 711 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 FAM215AQ9Y5M1 114 aa12.62□□□□□ -0.39
PKNOX1-209ENST00000560448 MBD3L4A6NDZ8 208 aaPredicted RBP12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 MBD3L3A6NE82 208 aaPredicted RBP12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 MBD3L5A6NJ08 208 aaPredicted RBP12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 HSPB2A8KAH6 182 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 SYT5O00445 386 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 ADAMDEC1O15204 470 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 GMFGO60234 142 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 IL2RAP01589 272 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 GPIP06744 558 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 GP1BBP13224 206 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 NCK1P16333 377 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 CHRNB4P30926 498 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 SLC1A3P43003 542 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 TRIP10Q15642 601 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 HSPB2Q16082 182 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 DCST1Q5T197 706 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 OR2A2Q6IF42 318 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 HMBOX1Q6NT76 420 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 OLIG3Q7RTU3 272 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 ARMC8Q8IUR7 673 aa12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 PAPD5Q8NDF8 572 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-209ENST00000560448 OR2T12Q8NG77 320 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms