RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TRNP1Q6NT89 227 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 BEST3Q8N1M1 668 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 CLMPQ9H6B4 373 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM181Q9P2C4 612 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.4
TRAF3-208ENST00000560371 TRAV18A0A075B6X5 111 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PPP6CO00743 305 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 AMY2AP04746 511 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 GYPBP06028 91 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 FGL1Q08830 312 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PLCXD3Q63HM9 321 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF417Q8TAU3 575 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 RAB39BQ96DA2 213 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 NCOR1O75376 2440 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF44P15621 663 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 CNN3Q15417 329 aaKnown RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ZADH2Q8N4Q0 377 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 OR5T1Q8NG75 326 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SENP5Q96HI0 755 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 GPR50Q13585 617 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 NKPD1Q17RQ9 610 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PXKQ7Z7A4 578 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 MARVELD2Q8N4S9 558 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 C7orf34Q96L11 122 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SLC6A20Q9NP91 592 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SUSD5O60279 629 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 TMEM244Q5VVB8 128 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 GARNL3Q5VVW2 1013 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SLC16A14Q7RTX9 510 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PIGCQ92535 297 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SLC46A1Q96NT5 459 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 MAN2C1Q9NTJ4 1040 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 OR5K3A6NET4 321 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 B8ZZF3 427 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 NUDT21O43809 227 aaKnown RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SLC43A1O75387 559 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 CD53P19397 219 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 RAB4AP20338 218 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 HLCSP50747 726 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SLC22A10Q63ZE4 541 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 METTL4Q8N3J2 472 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF597Q96LX8 424 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 SORT1Q99523 831 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 CXCL16Q9H2A7 254 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 TESQ9UGI8 421 aaKnown RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 MAGED1Q9Y5V3 778 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 FAM155AB1AL88 458 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 KLRC4-KLRK1H3BQV0 150 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 MITFO75030 526 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PHC1P78364 1004 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 UCN3Q969E3 161 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ST6GALNAC5Q9BVH7 336 aa12.57□□□□□ -0.4
TRAF3-208ENST00000560371 AK6Q9Y3D8 172 aaKnown RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF77Q15935 545 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF322Q6U7Q0 402 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ASRGL1Q7L266 308 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 PAPD5Q8NDF8 572 aaKnown RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SAP130Q9H0E3 1048 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ERVK13-1Q9NX77 482 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 MMP17Q9ULZ9 603 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 RHBDD3Q9Y3P4 386 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SLC22A7Q9Y694 548 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 TVP23AA6NH52 213 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 BMP2P12643 396 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 CYB561P49447 251 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 PPA1Q15181 289 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SYPL1Q16563 259 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 COL28A1Q2UY09 1125 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SAT2Q96F10 170 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 LCORQ96JN0 433 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF749O43361 778 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 GABRA2P47869 451 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 MTFR2Q6P444 385 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 MAFAQ8NHW3 353 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 NOSIPQ9Y314 301 aaKnown RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 TOXO94900 526 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 MYF6P23409 242 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 RAB31Q13636 194 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ESCO2Q56NI9 601 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF534Q76KX8 674 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 C3orf30Q96M34 536 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SYT11Q9BT88 431 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 TP63Q9H3D4 680 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SYNPO2LQ9H987 977 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 ST14Q9Y5Y6 855 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 FAM183AA6NL82 134 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 SIRPAP78324 504 aa12.56□□□□□ -0.4
TRAF3-208ENST00000560371 CAMK2DQ13557 499 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms