RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 NOXA1Q86UR1 476 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 LRRC17Q8N6Y2 441 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 SAMD12Q8N8I0 201 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 OR52E2Q8NGJ4 325 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 OR4K13Q8NH42 304 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 OR4C6Q8NH72 309 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 ABHD4Q8TB40 342 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 GFM1Q96RP9 751 aaKnown RBP9.26□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF559Q9BR84 538 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 NDC1Q9BTX1 674 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 FOLH1BQ9HBA9 442 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 KLHL1Q9NR64 748 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 CLEC4AQ9UMR7 237 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 TMEM5Q9Y2B1 443 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 SLC35A3Q9Y2D2 325 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 PCDHGB7Q9Y5F8 929 aa9.26□□□□□ -0.93
LRRC28-216ENST00000559819 A0A0B4J203 849 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 CHP2O43745 196 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SLC19A2O60779 497 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 TFP02787 698 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 TRAPPC2P0DI81 140 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 TRAPPC2BP0DI82 140 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 GABRG2P18507 467 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 S1PR1P21453 382 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 HTR4Q13639 388 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 CDK10Q15131 360 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ALG10BQ5I7T1 473 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF613Q6PF04 617 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 TAF8Q7Z7C8 310 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SLC44A3Q8N4M1 653 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 AVL9Q8NBF6 648 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 C7orf57Q8NEG2 295 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 OR5M3Q8NGP4 307 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZNRF4Q8WWF5 429 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SPACA7Q96KW9 195 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 NECTIN4Q96NY8 510 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ERMAPQ96PL5 475 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 TMEM246Q9BRR3 403 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 KCNN2Q9H2S1 579 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ERVMER34-1Q9H9K5 563 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 POT1Q9NUX5 634 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 A0A0G2JK05 382 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 FAM172BPA6NC97 362 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 OR6C70A6NIJ9 312 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF3P17036 446 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 HK1P19367 917 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SDHBP21912 280 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ALAS2P22557 587 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 PYCR1P32322 319 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 NAA10P41227 235 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 EIF2B5Q13144 721 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ADAM15Q13444 863 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 MZT2BQ6NZ67 158 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SFXN4Q6P4A7 337 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZCCHC12Q6PEW1 402 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 KIRREL2Q6UWL6 708 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 NPSR1Q6W5P4 371 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 GPR135Q8IZ08 494 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 METTL27Q8N6F8 245 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF655Q8N720 491 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 YIPF7Q8N8F6 280 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 FAM98AQ8NCA5 519 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 GPBAR1Q8TDU6 330 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 MRPL38Q96DV4 380 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 AHCYL2Q96HN2 611 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 PGLYRP3Q96LB9 341 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 KCNJ15Q99712 375 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 GALNT9Q9HCQ5 603 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 PRDM9Q9NQV7 894 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ADAM30Q9UKF2 790 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SEMA4FO95754 770 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 AK1P00568 194 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SLC35E2P0CK97 266 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 HIST1H1CP16403 213 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 CLDN20P56880 219 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SF3A2Q15428 464 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 RPL13AP3Q6NVV1 102 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ASCC1Q8N9N2 400 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 OR5H6Q8NGV6 325 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZPLD1Q8TCW7 415 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ZC3HAV1LQ96H79 300 aaKnown RBP9.25□□□□□ -0.93
LRRC28-216ENST00000559819 C14orf105Q9NVL8 296 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ADAM18Q9Y3Q7 739 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 ENTPD2Q9Y5L3 495 aa9.25□□□□□ -0.93
LRRC28-216ENST00000559819 SLC9B1P1A6NJY1 282 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 B4DGG1 531 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 MCIDASD6RGH6 385 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 EEF1E1O43324 174 aaKnown RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 PLPP2O43688 288 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 IGHV4-34P06331 123 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 GALP22466 123 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 CFL1P23528 166 aaKnown RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 HLA-DMAP28067 261 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 SRP9P49458 86 aaKnown RBP9.24□□□□□ -0.93
LRRC28-216ENST00000559819 YPEL5P62699 121 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 BTG2P78543 158 aa9.24□□□□□ -0.93
LRRC28-216ENST00000559819 RIN1Q13671 783 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms