RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MTERF4Q7Z6M4 381 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GGNQ86UU5 652 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GCNT2Q8N0V5 402 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 Q8N1Y9 231 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GTPBP8Q8N3Z3 284 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF527Q8NB42 609 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GLB1L3Q8NCI6 653 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 B4GALNT2Q8NHY0 566 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 POC1BQ8TC44 478 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 PHOSPHO1Q8TCT1 267 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 RAB8BQ92930 207 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF524Q96C55 264 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 OR52E6Q96RD3 313 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZBTB18Q99592 522 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 EBF4Q9BQW3 602 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 NMUR2Q9GZQ4 415 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF350Q9GZX5 532 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 HOXD1Q9GZZ0 328 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 SLC6A13Q9NSD5 602 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZIM2Q9NZV7 527 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF629Q9UEG4 869 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ICAM5Q9UMF0 924 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 CARD8Q9Y2G2 431 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 COA3Q9Y2R0 106 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 L3MBTL1Q9Y468 752 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 X6R8D5 127 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 MAP1AP78559 2803 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 A0A087WZY1 265 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 DUXAA6NLW8 204 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 NOTOA8MTQ0 251 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 HMGN4O00479 90 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 UBDO15205 165 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 KIAA0513O60268 411 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 UGT2B17O75795 530 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 RCBTB2O95199 551 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 IL6P05231 212 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 TMIGD3P0DMS9 266 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 PRKCAP17252 672 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 CTSSP25774 331 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 CHI3L1P36222 383 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 MRPL19P49406 292 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 KHKP50053 298 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ASCL1P50553 236 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF41P51814 821 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 MVDP53602 400 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 FOXF1Q12946 379 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 SNTB1Q13884 538 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GPR68Q15743 365 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 TOMM34Q15785 309 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF141Q15928 474 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 MAPK14Q16539 360 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 CTU2Q2VPK5 515 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GTDC1Q4AE62 458 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 AP1ARQ63HQ0 302 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 TYW3Q6IPR3 259 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 FRRS1Q6ZNA5 592 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 C16orf62Q7Z3J2 963 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 RNF130Q86XS8 419 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 GRAMD2AQ8IUY3 354 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 METTL25Q8N6Q8 603 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF614Q8N883 585 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 CKAP2Q8WWK9 683 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 XAGE5Q8WWM1 108 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 SMPDL3BQ92485 455 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 FIG4Q92562 907 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 VPS33AQ96AX1 596 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZBTB8AQ96BR9 441 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 INTS12Q96CB8 462 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ARSGQ96EG1 525 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 C14orf79Q96F83 325 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF845Q96IR2 970 aaPredicted RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ADGRG7Q96K78 797 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 RNF145Q96MT1 663 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZFP3Q96NJ6 502 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 PANX1Q96RD7 426 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 HHATLQ9HCP6 504 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 TCF7L2Q9NQB0 619 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 INTS9Q9NV88 658 aaKnown RBP5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 EXD2Q9NVH0 621 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 ZNF446Q9NWS9 450 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 JKAMPQ9P055 326 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 MKLN1Q9UL63 735 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 DTNAQ9Y4J8 743 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 AP4B1Q9Y6B7 739 aa5.41□□□□□ -1.54
CTDSPL2-204ENST00000558966 TEP1Q99973 2627 aaKnown RBP5.4□□□□□ -1.54
CTDSPL2-204ENST00000558966 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 A0A1W2PNV4 684 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 SERINC4A6NH21 518 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 SLC22A20A6NK97 555 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 EEF1E1-BLOC1S5C9J1V9 151 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 H3BNH8 94 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 SYT5O00445 386 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 POLR3GO15318 223 aaPredicted RBP5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 EEF1E1O43324 174 aaKnown RBP5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 EFNA2O43921 213 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 BCAS1O75363 584 aaPredicted RBP5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 STX11O75558 287 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 TNFSF13O75888 250 aa5.4□□□□□ -1.55
CTDSPL2-204ENST00000558966 TGDSO95455 350 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms