RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ALOX12BO75342 701 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 LIPAP38571 399 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 NR0B1P51843 470 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 OCA2Q04671 838 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 SNAPC1Q16533 368 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 GATSQ8NAP1 163 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 OR13C2Q8NGS9 318 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 C3orf49Q96BT1 292 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 BPIFA2Q96DR5 249 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 SAMD8Q96LT4 415 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 Q96MT0 163 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 OR52D1Q9H346 318 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 UBQLN3Q9H347 655 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 TBC1D23Q9NUY8 699 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 SIGLEC7Q9Y286 467 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 GPR52Q9Y2T5 361 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 MED31Q9Y3C7 131 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 KDM4EB2RXH2 506 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 ZNF354AO60765 605 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 PTP4A3O75365 173 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 DLGAP3O95886 979 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 SPINK2P20155 84 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 PSMB9P28065 219 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 ABCD3P28288 659 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 RBMS1P29558 406 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 MLLT10P55197 1068 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 NFATC3Q12968 1075 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 STX19Q8N4C7 294 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 ZFAND2BQ8WV99 257 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 FCGR1BQ92637 280 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 HS6ST2Q96MM7 605 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 LRFN5Q96NI6 719 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 DCUN1D5Q9BTE7 237 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 COPS7AQ9UBW8 275 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 WARS2Q9UGM6 360 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 KLK13Q9UKR3 277 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 TMEM5Q9Y2B1 443 aa11.85□□□□□ -0.51
SMAD3-207ENST00000558763 LSM2Q9Y333 95 aaKnown RBP11.85□□□□□ -0.51
SMAD3-207ENST00000558763 IGKV1D-42A0A075B6H8 117 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 A0A087WUJ7 227 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 TMEM200CA6NKL6 621 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 SLC2A10O95528 541 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 UBL4AP11441 157 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 NR4A1P22736 598 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 LCN1P31025 176 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 RNF4P78317 190 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 FAM69BQ5VUD6 431 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 AADACL4Q5VUY2 407 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 MEDAGQ5VYS4 303 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 TMEM205Q6UW68 189 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 FAM198BQ6UWH4 519 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 C6orf15Q6UXA7 325 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-207ENST00000558763 SLC34A3Q8N130 599 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 CADM2Q8N3J6 435 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 OMA1Q96E52 524 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 KRCC1Q9NPI7 259 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-207ENST00000558763 MRPS18AQ9NVS2 196 aaKnown RBP11.84□□□□□ -0.51
SMAD3-207ENST00000558763 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMAD3-207ENST00000558763 ICAM5Q9UMF0 924 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 CPAMD8Q8IZJ3 1885 aa11.84□□□□□ -0.51
SMAD3-207ENST00000558763 CEP295Q9C0D2 2601 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 C9J4A7 227 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 PRODHO43272 600 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 CH25HO95992 272 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 HEXBP07686 556 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 CCNA2P20248 432 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ST13P50502 369 aaKnown RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 PLCXD2Q0VAA5 305 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 SPCS2Q15005 226 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 HSDL2Q6YN16 418 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF517Q6ZMY9 492 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 C16orf47Q6ZP98 133 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 SLC29A4Q7RTT9 530 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF440Q8IYI8 595 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF527Q8NB42 609 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 OR2T33Q8NG76 320 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 PHOSPHO1Q8TCT1 267 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 HSPBAP1Q96EW2 488 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 OR5M11Q96RB7 305 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 MED17Q9NVC6 651 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 GPN3Q9UHW5 284 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 CARD8Q9Y2G2 431 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
SMAD3-207ENST00000558763 TRAV27A0A087WT01 109 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 A0A1W2PQD3 144 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ALG1L2C9J202 215 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 SCDO00767 359 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF264O43296 627 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 REM1O75628 298 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 EMP2P54851 167 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF117Q03924 483 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 CAMK2BQ13554 666 aa11.83□□□□□ -0.52
SMAD3-207ENST00000558763 RNLSQ5VYX0 342 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 255.2 ms