RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ZDHHC2Q9UIJ5 367 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 ICAM5Q9UMF0 924 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 PCDHGB4Q9UN71 923 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 CARD8Q9Y2G2 431 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 GPR52Q9Y2T5 361 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 DSCAMO60469 2012 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 MAP1AP78559 2803 aaPredicted RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 SERINC4A6NH21 518 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 RNASET2O00584 256 aaKnown RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF195O14628 629 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 TM9SF1O15321 606 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 BIRC5O15392 142 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 RGS16O15492 202 aaPredicted RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 EIF4E2O60573 245 aaKnown RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 TMCC2O75069 709 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 STX11O75558 287 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 NTN1O95631 604 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 OPN1LWP04000 364 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 THBDP07204 575 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 IL32P24001 234 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 LOXP28300 417 aaPredicted RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 SHC1P29353 583 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ETV4P43268 484 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 KHKP50053 298 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 CLDN8P56748 225 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 HPCAP84074 193 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 CBFBQ13951 182 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 CHI3L2Q15782 390 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 DPY19L1Q2PZI1 675 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 PGS1Q32NB8 556 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 NDUFAF6Q330K2 333 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 SLC25A53Q5H9E4 307 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 PDZK1Q5T2W1 519 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ATAD3BQ5T9A4 648 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 CBLN3Q6UW01 205 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 PRSS57Q6UWY2 283 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 TFAP2EQ6VUC0 442 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF704Q6ZNC4 412 aaPredicted RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 FCRLAQ7L513 359 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 C16orf62Q7Z3J2 963 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 SLC43A2Q8N370 569 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF781Q8N8C0 355 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 STEAP2Q8NFT2 490 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 OR5D16Q8NGK9 328 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 OR4A15Q8NGL6 344 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 OR5W2Q8NH69 310 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 RFWD2Q8NHY2 731 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 GPR119Q8TDV5 335 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 TMEM171Q8WVE6 324 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 OIT3Q8WWZ8 545 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ROBO4Q8WZ75 1007 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ST8SIA1Q92185 356 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ARSGQ96EG1 525 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 COX4I2Q96KJ9 171 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 PKNOX2Q96KN3 472 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 KLHDC3Q9BQ90 382 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 SRXN1Q9BYN0 137 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 POTEKPQ9BYX7 375 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF350Q9GZX5 532 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 GSX1Q9H4S2 264 aaPredicted RBP7.18□□□□□ -1.26
TRAF3-205ENST00000558700 IFT22Q9H7X7 185 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 POLE3Q9NRF9 147 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 EXD2Q9NVH0 621 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 PRR13Q9NZ81 148 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 KLHL9Q9P2J3 617 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 KCNE3Q9Y6H6 103 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 NAV3Q8IVL0 2385 aa7.18□□□□□ -1.26
TRAF3-205ENST00000558700 HEATR5AQ86XA9 2040 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ETV2O00321 342 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 HS3ST1O14792 307 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 SHOXO15266 292 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 KIAA0513O60268 411 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 PRKD3O94806 890 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 CSTAP01040 98 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 HEXAP06865 529 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 CREB1P16220 341 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 PGCP20142 388 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 MATN1P21941 496 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ECI1P42126 302 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 CLNS1AP54105 237 aaKnown RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ABCE1P61221 599 aaKnown RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 LTBQ06643 244 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF844Q08AG5 666 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 SKP2Q13309 424 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 QPRTQ15274 297 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 GPR68Q15743 365 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 TOMM34Q15785 309 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF141Q15928 474 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ARHGAP11BQ3KRB8 267 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 TMEM176BQ3YBM2 270 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 ANXA8L1Q5VT79 327 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 OR4F3Q6IEY1 312 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 CLEC9AQ6UXN8 241 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 PLEKHM3Q6ZWE6 761 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 C6orf120Q7Z4R8 191 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 YTHDF3Q7Z739 585 aaKnown RBP7.17□□□□□ -1.26
TRAF3-205ENST00000558700 TUSC5Q8IXB3 177 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 LRRC34Q8IZ02 419 aa7.17□□□□□ -1.26
TRAF3-205ENST00000558700 CLECL1Q8IZS7 167 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms