RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 GP6Q9HCN6 339 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 PNPOQ9NVS9 261 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 ASIC5Q9NY37 505 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 MARCOQ9UEW3 520 aaPredicted RBP13.77□□□□□ -0.21
TPM1-211ENST00000558314 RAI1Q7Z5J4 1906 aaPredicted RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 PRSS51A0A1B0GVH4 220 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CIB4A0PJX0 185 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CCT8L1PA6NM43 557 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CLDN24A6NM45 220 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CYTIPO60759 359 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 AGR2O95994 175 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 LBPP18428 481 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 S100A3P33764 101 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 OR2B6P58173 313 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 C21orf58P58505 322 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 PHC1P78364 1004 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CHRNEQ04844 493 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 STX3Q13277 289 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 PPA1Q15181 289 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 FAM174BQ3ZCQ3 159 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 CEP85LQ5SZL2 805 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 TYW3Q6IPR3 259 aaKnown RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 TMPPEQ6ZT21 453 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 Q6ZT83 130 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 ANKRD42Q8N9B4 389 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 ZHX1-C8orf76Q96EF9 292 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 OR11A1Q9GZK7 315 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 ALG2Q9H553 416 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 BCO1Q9HAY6 547 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 ACER3Q9NUN7 267 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 ZNF701Q9NV72 531 aaPredicted RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 ING1Q9UK53 422 aaPredicted RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 LIPT1Q9Y234 373 aa13.76□□□□□ -0.21
TPM1-211ENST00000558314 MAGED1Q9Y5V3 778 aaPredicted RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 FN1P02751 2386 aaKnown RBP13.76□□□□□ -0.21
TPM1-211ENST00000558314 ABCA2Q9BZC7 2435 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 FREM1Q5H8C1 2179 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 A0A1W2PR80 420 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 DPRXA6NFQ7 191 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 BIRC5O15392 142 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 KIAA0513O60268 411 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 RAMP1O60894 148 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 RAD51DO75771 328 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 C1QCP02747 245 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 GSNP06396 782 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 GGT1P19440 569 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 IGHV1-2P23083 117 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 IDH2P48735 452 aaKnown RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 SMU1Q2TAY7 513 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 ZNF672Q499Z4 452 aaPredicted RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 RNF130Q86XS8 419 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 PIAS4Q8N2W9 510 aaPredicted RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 ARFGAP2Q8N6H7 521 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 OR8J2Q8NGG1 315 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 PIWIL2Q8TC59 973 aaKnown RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 PNPT1Q8TCS8 783 aaKnown RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 SLC25A43Q8WUT9 341 aaPredicted RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 ZG16BQ96DA0 208 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 SORT1Q99523 831 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 EMC3Q9P0I2 261 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 CHRNA9Q9UGM1 479 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 SLC35A3Q9Y2D2 325 aa13.75□□□□□ -0.21
TPM1-211ENST00000558314 NOSIPQ9Y314 301 aaKnown RBP13.75□□□□□ -0.21
TPM1-211ENST00000558314 CSPG4Q6UVK1 2322 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 GOLGA8QA0A0J9YX86 632 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 GOLGA8OA6NCC3 632 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 KIAA1324LA8MWY0 1029 aaPredicted RBP13.74□□□□□ -0.21
TPM1-211ENST00000558314 E9PBE3 544 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 GOLGA8NF8WBI6 632 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 PGM1P36871 562 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
TPM1-211ENST00000558314 ZNF83P51522 516 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 CDH11P55287 796 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 UFM1P61960 85 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 FUT5Q11128 374 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 C9orf135Q5VTT2 229 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 HHATQ5VTY9 493 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 SAXO2Q658L1 398 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 HEPHL1Q6MZM0 1159 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 WDR93Q6P2C0 686 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 FRRS1Q6ZNA5 592 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 MTDHQ86UE4 582 aaKnown RBP13.74□□□□□ -0.21
TPM1-211ENST00000558314 CCDC103Q8IW40 242 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 ANKFN1Q8N957 763 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 OR52N5Q8NH56 324 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 MGARPQ8TDB4 240 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 IGFBPL1Q8WX77 278 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
TPM1-211ENST00000558314 APH1AQ96BI3 265 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 ARL5BQ96KC2 179 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 HS6ST2Q96MM7 605 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 ZIM3Q96PE6 472 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 TMEM109Q9BVC6 243 aa13.74□□□□□ -0.21
TPM1-211ENST00000558314 C1QTNF6Q9BXI9 259 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms