RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GPR85P60893 370 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 PPP2R2BQ00005 443 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 SEC23BQ15437 767 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 INPP5JQ15735 1006 aaPredicted RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 ZNF766Q5HY98 468 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 FAHD1Q6P587 224 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 TBPL2Q6SJ96 375 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 ARSKQ6UWY0 536 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 MBOAT2Q6ZWT7 520 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 AQP11Q8NBQ7 271 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 MAGEE2Q8TD90 523 aaPredicted RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 TMEM255BQ8WV15 326 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 SNRNP27Q8WVK2 155 aaKnown RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 ZBTB8AQ96BR9 441 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 SCMH1Q96GD3 660 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 MRGPRX4Q96LA9 322 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 BARD1Q99728 777 aaKnown RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 SLC29A1Q99808 456 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 KLHDC3Q9BQ90 382 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 ZFP64Q9NPA5 681 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 KLHL1Q9NR64 748 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 DEPPQ9NTK1 212 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 TUBA8Q9NY65 449 aaPredicted RBP15.32■□□□□ 0.04
SNX1-203ENST00000558040 DKKL1Q9UK85 242 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 VDAC3Q9Y277 283 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 C15orf41Q9Y2V0 281 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 HRH3Q9Y5N1 445 aa15.32■□□□□ 0.04
SNX1-203ENST00000558040 HEATR5AQ86XA9 2040 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 TRAV17A0A0B4J275 112 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 B4DXG7 233 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 ETV2O00321 342 aaPredicted RBP15.31■□□□□ 0.04
SNX1-203ENST00000558040 ADAP00813 363 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 ITGB2P05107 769 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 ALPLP05186 524 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 CDH2P19022 906 aaPredicted RBP15.31■□□□□ 0.04
SNX1-203ENST00000558040 IGFBP5P24593 272 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 DPP4P27487 766 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 APOBEC1P41238 236 aaKnown RBP15.31■□□□□ 0.04
SNX1-203ENST00000558040 CXADRP78310 365 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 MERTKQ12866 999 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 KCNAB2Q13303 367 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 TBR1Q16650 682 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 PLPPR5Q32ZL2 321 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 RFX4Q33E94 735 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 SLC25A53Q5H9E4 307 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 IGFL3Q6UXB1 125 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 IZUMO2Q6UXV1 221 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 LINC00114Q6XXX2 140 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 WDR88Q6ZMY6 472 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 GALNTL5Q7Z4T8 443 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 SULF2Q8IWU5 870 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 CDK20Q8IZL9 346 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 FAM98AQ8NCA5 519 aaKnown RBP15.31■□□□□ 0.04
SNX1-203ENST00000558040 OR9Q2Q8NGE9 314 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 GNRHR2Q96P88 292 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 FEVQ99581 238 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 TACO1Q9BSH4 297 aaKnown RBP15.31■□□□□ 0.04
SNX1-203ENST00000558040 TMEM43Q9BTV4 400 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 ZNF426Q9BUY5 554 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 SLC19A3Q9BZV2 496 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 SMURF2Q9HAU4 748 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 OSGIN1Q9UJX0 560 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 TMEM5Q9Y2B1 443 aa15.31■□□□□ 0.04
SNX1-203ENST00000558040 TMED7-TICAM2A0A0A6YYA0 188 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 C7orf72A4D263 438 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 HTR3EA5X5Y0 456 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 LRRC3CA6NJW4 275 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 APC2O95996 2303 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 HK1P19367 917 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 CBLP22681 906 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 ADH6P28332 368 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 SRD5A2P31213 254 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 HSPA13P48723 471 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 MAP2K6P52564 334 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 RAD23AP54725 363 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 FOXF1Q12946 379 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.3■□□□□ 0.041e-6■□□□□ 10.6
SNX1-203ENST00000558040 KDM4DQ6B0I6 523 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 ZNF770Q6IQ21 691 aaPredicted RBP15.3■□□□□ 0.04
SNX1-203ENST00000558040 PGBD2Q6P3X8 592 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 NRMQ8IXM6 262 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 GNPDA2Q8TDQ7 276 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 RDH12Q96NR8 316 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 DGCR6LQ9BY27 220 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 HES7Q9BYE0 225 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 SERINC1Q9NRX5 453 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 KRT84Q9NSB2 600 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 SMPD3Q9NY59 655 aaPredicted RBP15.3■□□□□ 0.04
SNX1-203ENST00000558040 ENOPH1Q9UHY7 261 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 POFUT2Q9Y2G5 429 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 TMED7Q9Y3B3 224 aa15.3■□□□□ 0.04
SNX1-203ENST00000558040 SPIN1Q9Y657 262 aaPredicted RBP15.3■□□□□ 0.04
SNX1-203ENST00000558040 AKAP13Q12802 2813 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 TAF4O00268 1085 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 NTN1O95631 604 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 GASTP01350 101 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 ZNF17P17021 662 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 GSTM3P21266 225 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 GDF1P27539 372 aa15.29■□□□□ 0.04
SNX1-203ENST00000558040 MEOX1P50221 254 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms