RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PYURFQ96I23 114 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 TIMP4Q99727 224 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 SELENONQ9NZV5 590 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 STOML1Q9UBI4 398 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 PRDM4Q9UKN5 801 aa19.2■□□□□ 0.66
CASC4-204ENST00000557945 A0A1B0GWA3 101 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 BCKDKO14874 412 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 FMO6PO60774 539 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 TPOP07202 933 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 ELK4P28324 431 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 APOBEC1P41238 236 aaKnown RBP19.19■□□□□ 0.66
CASC4-204ENST00000557945 SRYQ05066 204 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 SELENBP1Q13228 472 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 C3AR1Q16581 482 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.19■□□□□ 0.663e-6■■■■■ 26.9
CASC4-204ENST00000557945 ENTPD8Q5MY95 495 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 WLSQ5T9L3 541 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 ATCAYQ86WG3 371 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 UBQLNLQ8IYU4 475 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 LILRA2Q8N149 483 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 LSMEM1Q8N8F7 131 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 C3orf49Q96BT1 292 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 ADAM19Q9H013 955 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 OSGIN1Q9UJX0 560 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 CAMK2AQ9UQM7 478 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 AP4B1Q9Y6B7 739 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 RP1L1Q8IWN7 2480 aaPredicted RBP19.19■□□□□ 0.66
CASC4-204ENST00000557945 TMED7-TICAM2A0A0A6YYA0 188 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 SEC14L5O43304 696 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 EFNA2O43921 213 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 SLC19A2O60779 497 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 CIB2O75838 187 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 CXCR1P25024 350 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 YAP1P46937 504 aaKnown RBP19.19■□□□□ 0.66
CASC4-204ENST00000557945 LHX2P50458 406 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 DLX5P56178 289 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 RAC1P63000 192 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 MRPL49Q13405 166 aaKnown RBP19.19■□□□□ 0.66
CASC4-204ENST00000557945 ZNF605Q86T29 641 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 GALNT11Q8NCW6 608 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 AMBRA1Q9C0C7 1298 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 ALKBH4Q9NXW9 302 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 TMED7Q9Y3B3 224 aa19.19■□□□□ 0.66
CASC4-204ENST00000557945 CFAP46Q8IYW2 2715 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 NBASA2RRP1 2371 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 TCRBV5S2A0A599 114 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 PRRG2O14669 202 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 SFTPDP35247 375 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 TAS2R41P59536 307 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 ALG10BQ5I7T1 473 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 C1orf146Q5VVC0 180 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 C3orf33Q6P1S2 294 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 ULK3Q6PHR2 472 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 SPATA24Q86W54 205 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 ADGRG3Q86Y34 549 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 FAM57AQ8TBR7 257 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 ADAMTS16Q8TE57 1224 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 DNAJA4Q8WW22 397 aaPredicted RBP19.18■□□□□ 0.66
CASC4-204ENST00000557945 SLC47A1Q96FL8 570 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 WDYHV1Q96HA8 205 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 SEPHS2Q99611 448 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 PNPLA3Q9NST1 481 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 CHRNA9Q9UGM1 479 aa19.18■□□□□ 0.66
CASC4-204ENST00000557945 SPIN1Q9Y657 262 aaPredicted RBP19.18■□□□□ 0.66
CASC4-204ENST00000557945 ELOA3DA6NLF2 546 aaPredicted RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 GJE1A6NN92 205 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 H0Y3Z8 333 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 hCG_2039718K7EN88 272 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 TFPIP10646 304 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 CDH12P55289 794 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 CLDN20P56880 219 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 FOXD4Q12950 439 aaPredicted RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 BCL2A1Q16548 175 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 ELOA3BQ3SY89 546 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 TMEM176BQ3YBM2 270 aaPredicted RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 GXYLT1Q4G148 440 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 ZNF585AQ6P3V2 769 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 ZNF613Q6PF04 617 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 ATG4DQ86TL0 474 aaPredicted RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 CD163Q86VB7 1156 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 LSRQ86X29 649 aaPredicted RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 ZGRF1Q86YA3 2104 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 PM20D2Q8IYS1 436 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 MEIOBQ8N635 442 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 ELOA3Q8NG57 546 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 POP5Q969H6 163 aaKnown RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 UTP4Q969X6 686 aaKnown RBP19.17■□□□□ 0.66
CASC4-204ENST00000557945 OSGIN2Q9Y236 505 aa19.17■□□□□ 0.66
CASC4-204ENST00000557945 A0A0B4J2E0 115 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 A0A1B0GX12 115 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 TMEM72A0PK05 275 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 TRAPPC13A5PLN9 417 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 ERICH4A6NGS2 130 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 AQP12BA6NM10 295 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 H0YC42 278 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 EIF1AYO14602 144 aaKnown RBP19.16■□□□□ 0.66
CASC4-204ENST00000557945 PNMTP11086 282 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 CPN1P15169 458 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 ZNF708P17019 499 aa19.16■□□□□ 0.66
CASC4-204ENST00000557945 GNLYP22749 145 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms