RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 MCCC1Q96RQ3 725 aaPredicted RBP3.25□□□□□ -1.89
CHD8-212ENST00000557329 PAFAH2Q99487 392 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 SELENOSQ9BQE4 189 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 TTYH2Q9BSA4 534 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 POLR1EQ9GZS1 481 aaKnown RBP3.25□□□□□ -1.89
CHD8-212ENST00000557329 SHARPINQ9H0F6 387 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 PLEKHF2Q9H8W4 249 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 ZWILCHQ9H900 591 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 WDR54Q9H977 334 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 EQTNQ9NQ60 294 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 SERINC1Q9NRX5 453 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 INTS9Q9NV88 658 aaKnown RBP3.25□□□□□ -1.89
CHD8-212ENST00000557329 ADAM22Q9P0K1 906 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 C6orf203Q9P0P8 240 aaPredicted RBP3.25□□□□□ -1.89
CHD8-212ENST00000557329 CPSF2Q9P2I0 782 aaKnown RBP3.25□□□□□ -1.89
CHD8-212ENST00000557329 CIDEBQ9UHD4 219 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 CFAP45Q9UL16 551 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 NEU3Q9UQ49 428 aa3.25□□□□□ -1.89
CHD8-212ENST00000557329 ANKRD12Q6UB98 2062 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 A0A0J9YVX5 310 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 A0A0J9YY10 115 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ATP6AP2A0A1C7CYW4 349 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 RGSL1A5PLK6 1076 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 C2orf81A6NN90 581 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 TMCO5BA8MYB1 307 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 HMGB1P1B2RPK0 211 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 UBFD1O14562 309 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 EPHB6O15197 1021 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 PRPSAP2O60256 369 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 GLRA3O75311 464 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ATP6AP2O75787 350 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 GFPT2O94808 682 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 SMC2O95347 1197 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 HSP90AA1P07900 732 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 LINGO3P0C6S8 592 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 DANCRP0C864 163 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 C8orf89P0DMQ9 161 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 PORP16435 677 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 MAGP20916 626 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 EEF1B2P24534 225 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 PSMA2P25787 234 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 CD86P42081 329 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 MTIF2P46199 727 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 NSFP46459 744 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 CYB561P49447 251 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 CSE1LP55060 971 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 CDH6P55285 790 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ATP5J2P56134 94 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 PPIAP62937 165 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 LRRC63Q05C16 580 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 TMEM187Q14656 261 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 TAZQ16635 292 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 SLC25A35Q3KQZ1 300 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ZCWPW2Q504Y3 356 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 IGSF11Q5DX21 431 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ZNF658Q5TYW1 1059 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 DNAJC24Q6P3W2 148 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 CLEC17AQ6ZS10 378 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 IL17RELQ6ZVW7 336 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 COX15Q7KZN9 410 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 GTSCR1Q86UQ5 136 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 SIAH3Q8IW03 269 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ZNF440Q8IYI8 595 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 TMEM156Q8N614 296 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 C3orf56Q8N813 242 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 MAPKAPK5-AS1Q8N8E1 139 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 OR13C3Q8NGS6 347 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 OR13J1Q8NGT2 312 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 OR52N5Q8NH56 324 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 CFAP61Q8NHU2 1237 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 SSMEM1Q8WWF3 244 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ZNRF4Q8WWF5 429 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 NELFBQ8WX92 580 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 TFGQ92734 400 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 RNASE6Q93091 150 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 SLC22A18Q96BI1 424 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 ZBED6CLQ96FA7 236 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 PIK3IP1Q96FE7 263 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 MGME1Q9BQP7 344 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 CCM2Q9BSQ5 444 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 PELI2Q9HAT8 420 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 B3GAT1Q9P2W7 334 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 C19orf25Q9UFG5 118 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 MTRF1LQ9UGC7 380 aaKnown RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 ASF1AQ9Y294 204 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 PPIL1Q9Y3C6 166 aa3.24□□□□□ -1.89
CHD8-212ENST00000557329 NSD1Q96L73 2696 aaPredicted RBP3.24□□□□□ -1.89
CHD8-212ENST00000557329 IGKV3D-20A0A0C4DH25 116 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 GLYATL1P3A0A0U1RQE8 302 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 GOLGA6L4A6NEF3 574 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 MGAT4DA6NG13 374 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 G3V3Y1 287 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 TLX2O43763 284 aaPredicted RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 CDK2AP2O75956 126 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 FGFR1OPO95684 399 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 LSM8O95777 96 aaKnown RBP3.23□□□□□ -1.89
CHD8-212ENST00000557329 GNA14O95837 355 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 NGFP01138 241 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 RALBP11234 206 aa3.23□□□□□ -1.89
CHD8-212ENST00000557329 CMA1P23946 247 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms