RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SLC25A43Q8WUT9 341 aaPredicted RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 NEUROG1Q92886 237 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 RAB8BQ92930 207 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 TESCQ96BS2 214 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 MUCL1Q96DR8 90 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF300Q96RE9 604 aaPredicted RBP14.07□□□□□ -0.16
TUBB3-213ENST00000557262 C20orf27Q9GZN8 174 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 SAP130Q9H0E3 1048 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 SLC35A3Q9Y2D2 325 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 WDR45Q9Y484 360 aa14.07□□□□□ -0.16
TUBB3-213ENST00000557262 LYZL6O75951 148 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SOD3P08294 240 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 TFPIP10646 304 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
TUBB3-213ENST00000557262 IDUAP35475 653 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SLC1A6P48664 564 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 BSPH1Q075Z2 132 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 CASP8Q14790 479 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 PDK3Q15120 406 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 PPA1Q15181 289 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 CLEC12BQ2HXU8 276 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SYT14P1Q58G82 188 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SAXO2Q658L1 398 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 TYW3Q6IPR3 259 aaKnown RBP14.06□□□□□ -0.16
TUBB3-213ENST00000557262 WDR93Q6P2C0 686 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SEZ6L2Q6UXD5 910 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 ATG4DQ86TL0 474 aaPredicted RBP14.06□□□□□ -0.16
TUBB3-213ENST00000557262 P2RY8Q86VZ1 359 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 ANKRD46Q86W74 232 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF563Q8TA94 476 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 GTPBP3Q969Y2 492 aaKnown RBP14.06□□□□□ -0.16
TUBB3-213ENST00000557262 ROPN1LQ96C74 230 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SSU72Q9NP77 194 aaKnown RBP14.06□□□□□ -0.16
TUBB3-213ENST00000557262 SPIN1Q9Y657 262 aaPredicted RBP14.06□□□□□ -0.16
TUBB3-213ENST00000557262 HIVEP2P31629 2446 aa14.06□□□□□ -0.16
TUBB3-213ENST00000557262 A0A1W2PP18 115 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 INAFM1C9JVW0 142 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 ANKRD28O15084 1053 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 TM9SF1O15321 606 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 RGS16O15492 202 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-213ENST00000557262 KIAA0513O60268 411 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 PGM3O95394 542 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 LBPP18428 481 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 GGT1P19440 569 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 IGHV1-2P23083 117 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 EDNRAP25101 427 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 RYKP34925 604 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 CLK1P49759 484 aaKnown RBP14.05□□□□□ -0.16
TUBB3-213ENST00000557262 KCNJ10P78508 379 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 STK11Q15831 433 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 ETFDHQ16134 617 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 DPY19L1Q2PZI1 675 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 KRT71Q3SY84 523 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 TIMM23BQ5SRD1 257 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 TNFAIP8L2Q6P589 184 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-213ENST00000557262 PRIMA1Q86XR5 153 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 LRRC34Q8IZ02 419 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 KIRREL3Q8IZU9 778 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 FAM71CQ8NEG0 241 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 ZG16BQ96DA0 208 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 NEURL3Q96EH8 262 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 CCDC106Q9BWC9 280 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 TRIM2Q9C040 744 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 CTPS2Q9NRF8 586 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.05□□□□□ -0.16
TUBB3-213ENST00000557262 CISD1Q9NZ45 108 aaKnown RBP14.05□□□□□ -0.16
TUBB3-213ENST00000557262 EMC3Q9P0I2 261 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 LIPT1Q9Y234 373 aa14.05□□□□□ -0.16
TUBB3-213ENST00000557262 IGKV3D-15A0A087WSY6 115 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 PMS2P2O95744 297 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 DHRS4L1P0CG22 281 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 S100A3P33764 101 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 CHI3L1P36222 383 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 CLNS1AP54105 237 aaKnown RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 FBXW9Q5XUX1 488 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 FRRS1Q6ZNA5 592 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 GRINAQ7Z429 371 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 ADGRG3Q86Y34 549 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 MREGQ8N565 214 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 ZNF433Q8N7K0 673 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 KBTBD8Q8NFY9 601 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 ZHX1-C8orf76Q96EF9 292 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 SORT1Q99523 831 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 GRIP2Q9C0E4 1043 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 MARCOQ9UEW3 520 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 CHRNA9Q9UGM1 479 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 HAO1Q9UJM8 370 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 NOSIPQ9Y314 301 aaKnown RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 HDGFL3Q9Y3E1 203 aa14.04□□□□□ -0.16
TUBB3-213ENST00000557262 MAGED1Q9Y5V3 778 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-213ENST00000557262 PRAMEF27A3QJZ7 478 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 GPR171O14626 319 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 RAMP1O60894 148 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 BCAS1O75363 584 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-213ENST00000557262 COX5AP20674 150 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 CDKN1AP38936 164 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 KHKP50053 298 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 CHRNEQ04844 493 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms