RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 PMM1Q92871 262 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 CPNE4Q96A23 557 aaPredicted RBP20.22■□□□□ 0.83
PABPN1-207ENST00000556821 TMEM19Q96HH6 336 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 GPATCH1Q9BRR8 931 aaKnown RBP20.22■□□□□ 0.83
PABPN1-207ENST00000556821 CCDC106Q9BWC9 280 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 VAPAQ9P0L0 249 aa20.22■□□□□ 0.83
PABPN1-207ENST00000556821 RAI1Q7Z5J4 1906 aaPredicted RBP20.21■□□□□ 0.83
PABPN1-207ENST00000556821 A6NNC1 897 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 DBIP07108 87 aaKnown RBP20.21■□□□□ 0.83
PABPN1-207ENST00000556821 EPXP11678 715 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 IL7RP16871 459 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 PCYT1AP49585 367 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 CRISP3P54108 245 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 FAM27E3Q08E93 113 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 ZNF836Q6ZNA1 936 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 VRK2Q86Y07 508 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 OR6K3Q8NGY3 331 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 PROCRQ9UNN8 238 aa20.21■□□□□ 0.83
PABPN1-207ENST00000556821 PLGP00747 810 aaPredicted RBP20.2■□□□□ 0.82
PABPN1-207ENST00000556821 KLK2P20151 261 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 AGTR1P30556 359 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 SLC7A1P30825 629 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 CD79BP40259 229 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 FADDQ13158 208 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 DAZAP2Q15038 168 aaPredicted RBP20.2■□□□□ 0.82
PABPN1-207ENST00000556821 GRINAQ7Z429 371 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 PEX5LQ8IYB4 626 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 ZNF563Q8TA94 476 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 NRGNQ92686 78 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 MAL2Q969L2 176 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 SIKE1Q9BRV8 207 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 GSX1Q9H4S2 264 aaPredicted RBP20.2■□□□□ 0.82
PABPN1-207ENST00000556821 IKZF5Q9H5V7 419 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 DLL4Q9NR61 685 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 CTPS2Q9NRF8 586 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 GLRX2Q9NS18 164 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 RASSF1Q9NS23 344 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 RLIMQ9NVW2 624 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 CALML5Q9NZT1 146 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 EMC9Q9Y3B6 208 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 CHST2Q9Y4C5 530 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 GMEB1Q9Y692 573 aa20.2■□□□□ 0.82
PABPN1-207ENST00000556821 PRRC2AP48634 2157 aaKnown RBP20.19■□□□□ 0.82
PABPN1-207ENST00000556821 A0A0G2JND7 137 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 A0A1W2PP18 115 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 CDHR4A6H8M9 788 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 NCF2P19878 526 aaPredicted RBP20.19■□□□□ 0.82
PABPN1-207ENST00000556821 ENPP1P22413 925 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 CTBP2P56545 445 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 SYT14P1Q58G82 188 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 OR52P1PQ8NH57 321 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 OR5B2Q96R09 309 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 FOXC2Q99958 501 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 RAD21L1Q9H4I0 556 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 A4GALTQ9NPC4 353 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 TIGARQ9NQ88 270 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 PLSCR4Q9NRQ2 329 aa20.19■□□□□ 0.82
PABPN1-207ENST00000556821 THUMPD1Q9NXG2 353 aaKnown RBP20.19■□□□□ 0.82
PABPN1-207ENST00000556821 IGHV3-15A0A0B4J1V0 119 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 SH3D21A4FU49 640 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 FAAHO00519 579 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 DNAJA1P31689 397 aaKnown RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 APOBEC1P41238 236 aaKnown RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 IDH2P48735 452 aaKnown RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 RAC3P60763 192 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 EPS8Q12929 822 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 CGB2Q6NT52 195 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 FCRLAQ7L513 359 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 ADGRG3Q86Y34 549 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 SLC25A43Q8WUT9 341 aaPredicted RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 POLDIP3Q9BY77 421 aaKnown RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 RABEP2Q9H5N1 569 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 ELOVL5Q9NYP7 299 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 CHRNA9Q9UGM1 479 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 ING1Q9UK53 422 aaPredicted RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 ZNF443Q9Y2A4 671 aaPredicted RBP20.18■□□□□ 0.82
PABPN1-207ENST00000556821 TESMINQ9Y4I5 508 aa20.18■□□□□ 0.82
PABPN1-207ENST00000556821 A0A0G2JPF8 293 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 HNRNPCL2B2RXH8 293 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 HNRNPCL3B7ZW38 293 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 SMAD9O15198 467 aaKnown RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 HNRNPCL1O60812 293 aaKnown RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 THBS1P07996 1170 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 PABPC4LP0CB38 370 aaKnown RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 HNRNPCL4P0DMR1 293 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 POU2F1P14859 743 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 DIO1P49895 249 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 IST1P53990 364 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 GNA13Q14344 377 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 RNPS1Q15287 305 aaKnown RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 LIN52Q52LA3 116 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 RNF220Q5VTB9 566 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 DLEU7Q6UYE1 221 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 REXO5Q96IC2 774 aaKnown RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 DACH2Q96NX9 599 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 TMEM120AQ9BXJ8 343 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 RSPO3Q9BXY4 272 aaPredicted RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 CLEC4MQ9H2X3 399 aaPredicted RBP20.17■□□□□ 0.82
PABPN1-207ENST00000556821 BCL2L10Q9HD36 194 aa20.17■□□□□ 0.82
PABPN1-207ENST00000556821 SERINC1Q9NRX5 453 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms