RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 EGR4Q05215 589 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 SRSF6Q13247 344 aaKnown RBP12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 FHL1Q13642 323 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 NTRK2Q16620 822 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 ZNF791Q3KP31 576 aaPredicted RBP12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 NADK2Q4G0N4 442 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 PRAMEF20Q5VT98 475 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 NUP54Q7Z3B4 507 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 MRGPREQ86SM8 312 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 TMPRSS12Q86WS5 348 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 RPS19BP1Q86WX3 136 aaKnown RBP12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 DNAJA4Q8WW22 397 aaPredicted RBP12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 OIT3Q8WWZ8 545 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 TMCO6Q96DC7 493 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 YTHDF1Q9BYJ9 559 aaKnown RBP12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 DLL3Q9NYJ7 618 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 IL20Q9NYY1 176 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 KLRF1Q9NZS2 232 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 GPR52Q9Y2T5 361 aa12.59□□□□□ -0.39
EFCAB11-212ENST00000556639 CPAMD8Q8IZJ3 1885 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 PROB1E7EW31 1015 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 FOXD2O60548 495 aaPredicted RBP12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 FAM20BO75063 409 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 SLC2A10O95528 541 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 CD63P08962 238 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 NAGAP17050 411 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 SLC1A3P43003 542 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 P2RX1P51575 399 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 CTBP2P56545 445 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 ATP1A1-AS1Q5TC04 95 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 TMPRSS11FQ6ZWK6 438 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 IL22RA1Q8N6P7 574 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 B4GALNT2Q8NHY0 566 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 GPR119Q8TDV5 335 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 HS6ST2Q96MM7 605 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 OR52D1Q9H346 318 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 TBC1D23Q9NUY8 699 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
EFCAB11-212ENST00000556639 A0A087WXM4 84 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 EFCAB9A8MZ26 197 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 SHISA8B8ZZ34 492 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 TLX2O43763 284 aaPredicted RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CEACAM1P13688 526 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 TCEA1P23193 301 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CASP3P42574 277 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 QPRTQ15274 297 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 BROXQ5VW32 411 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 C1QL3Q5VWW1 255 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ARSKQ6UWY0 536 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 DEPDC4Q8N2C3 294 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ZNF540Q8NDQ6 660 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 BRIX1Q8TDN6 353 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 RNF138Q8WVD3 245 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 GPR87Q9BY21 358 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 METTL7AQ9H8H3 244 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 OSGIN1Q9UJX0 560 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 SIGLEC7Q9Y286 467 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CHCHD2Q9Y6H1 151 aaPredicted RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 LOC400499M0QZD8 3231 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ZC3H12DA2A288 527 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 TRIM64CA6NLI5 447 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 C21orf140B9A014 251 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 G3V3Y1 287 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ENTPD6O75354 484 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 F10P00742 488 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ADRA2AP08913 450 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CCDC159P0C7I6 412 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 RBM34P42696 430 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 RPL5P46777 297 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 MLF1P58340 268 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 SLC35A2P78381 396 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 FOXK1P85037 733 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 LTBQ06643 244 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 SLC27A4Q6P1M0 643 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CASP12Q6UXS9 341 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 KCTD8Q6ZWB6 473 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 AHSA2Q719I0 299 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 TTC9Q92623 222 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CCDC90BQ9GZT6 254 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 HHATLQ9HCP6 504 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 VDAC3Q9Y277 283 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CDH10Q9Y6N8 788 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 AKAP13Q12802 2813 aa12.57□□□□□ -0.4
EFCAB11-212ENST00000556639 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
EFCAB11-212ENST00000556639 PTP4A3O75365 173 aa12.56□□□□□ -0.4
EFCAB11-212ENST00000556639 HPP00738 406 aa12.56□□□□□ -0.4
EFCAB11-212ENST00000556639 SLC6A8P48029 635 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms