RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GPM6BQ13491 265 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 SLC29A4Q7RTT9 530 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 NLGN4YQ8NFZ3 816 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZFYVE21Q9BQ24 234 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 NRIP3Q9NQ35 241 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRDM9Q9NQV7 894 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RAB40ALP0C0E4 278 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 NFYAP23511 347 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 TEAD1P28347 426 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 CRYBB2P43320 205 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZFP36L2P47974 494 aaKnown RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ALG10Q5BKT4 473 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RFPL4BQ6ZWI9 263 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 CAMKMTQ7Z624 323 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RAB40AQ8WXH6 277 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ARRDC3Q96B67 414 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ARHGAP9Q9BRR9 750 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 C20orf85Q9H1P6 137 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 EPHA6Q9UF33 1036 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 AKR1C4P17516 323 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 C5AR1P21730 350 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 TTC3P53804 2025 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 RAE1P78406 368 aaKnown RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 OC90Q02509 493 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ABCA11PQ4W5N1 156 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF440Q8IYI8 595 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 OR14A2Q96R54 314 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 TNFRSF13CQ96RJ3 184 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 FAM83CQ9BQN1 747 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 KCNN3Q9UGI6 736 aa14□□□□□ -0.17
ARHGEF40-207ENST00000556399 TESQ9UGI8 421 aaKnown RBP14□□□□□ -0.17
ARHGEF40-207ENST00000556399 CCDC85CA6NKD9 419 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 K7ESM1 405 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 WRBO00258 174 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 PHYHO14832 338 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 GPRIN2O60269 458 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 SLC2A10O95528 541 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 PLGP00747 810 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 CPMP14384 443 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 CSNK1G2P78368 415 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 DEFB103AP81534 67 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 NKPD1Q17RQ9 610 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 OR13C3Q8NGS6 347 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 HINT3Q9NQE9 182 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 NUMA1Q14980 2115 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZC3H12DA2A288 527 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 TLX3O43711 291 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 TMPRSS11DO60235 418 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRSS45Q7RTY3 260 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 TMEM150AQ86TG1 271 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 SMARCD2Q92925 531 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 RBPMSQ93062 196 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 SGPP1Q9BX95 441 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 IL21RQ9HBE5 538 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 MYEF2Q9P2K5 600 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF281Q9Y2X9 895 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 COL4A5P29400 1685 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 RPL35P42766 123 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 HYAL4Q2M3T9 481 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 C1QTNF12Q5T7M4 302 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 ULK3Q6PHR2 472 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 STX12Q86Y82 276 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 PM20D2Q8IYS1 436 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 GTPBP8Q8N3Z3 284 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 BOLLQ8N9W6 283 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 BCL7CQ8WUZ0 217 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 PTCHD1Q96NR3 888 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 WDFY2Q96P53 400 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 DCLRE1CQ96SD1 692 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 PCDHB16Q9NRJ7 776 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 ASF1BQ9NVP2 202 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 NRXN2Q9P2S2 1712 aa13.99□□□□□ -0.17
ARHGEF40-207ENST00000556399 TVP23AA6NH52 213 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 C12orf73Q69YU5 71 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 C1orf94Q6P1W5 598 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 RDH10Q8IZV5 341 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 TMEM99Q8N816 258 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 SLC16A11Q8NCK7 471 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 GOT1L1Q8NHS2 421 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 PEX11GQ96HA9 241 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 KLHL15Q96M94 604 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZDHHC5Q9C0B5 715 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 C14orf166Q9Y224 244 aaKnown RBP13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 CHST2Q9Y4C5 530 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 NPFFR2Q9Y5X5 522 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 H2BFMP0C1H6 154 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 FAM189A2Q15884 450 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 FXNQ16595 210 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 TCEAL5Q5H9L2 206 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 TMEM185AQ8NFB2 350 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 MYADMQ96S97 322 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 DPYSL5Q9BPU6 564 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 MEPEQ9NQ76 525 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 FBXO9Q9UK97 447 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 ERVK-19Q9WJR5 959 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 TEX13DA0A0J9YY54 714 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 SYPP08247 313 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 CEBPBP17676 345 aa13.98□□□□□ -0.17
ARHGEF40-207ENST00000556399 S100GP29377 79 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms