RNA–Protein interactions for RNA: ENST00000556355.5

SRP54-AS1-203, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 5 BASIC

Gene SRP54-AS1, Length 603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-203ENST00000556355 CSRP3P50461 194 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SUCLG1P53597 346 aaKnown RBP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 PLD1Q13393 1074 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 DPYSL3Q14195 570 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 RCN1Q15293 331 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 TIGITQ495A1 244 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CTSL3PQ5NE16 218 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 PDZK1Q5T2W1 519 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 METTL11BQ5VVY1 283 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 WSCD1Q658N2 575 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ATL3Q6DD88 541 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 PAQR6Q6TCH4 344 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 METAP1DQ6UB28 335 aaPredicted RBP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 FAM228AQ86W67 206 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 HIPK1Q86Z02 1210 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CCDC65Q8IXS2 484 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZNF440Q8IYI8 595 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ATP6V0D2Q8N8Y2 350 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 FAM83FQ8NEG4 500 aaPredicted RBP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 C17orf47Q8NEP4 570 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 OR6T1Q8NGN1 323 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 C10orf35Q96D05 121 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SLC38A2Q96QD8 506 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 MCCC1Q96RQ3 725 aaPredicted RBP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 RAB34Q9BZG1 259 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ROPN1BQ9BZX4 212 aaPredicted RBP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 GLIPR2Q9H4G4 154 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 IKZF5Q9H5V7 419 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CUTCQ9NTM9 273 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SIGLEC8Q9NYZ4 499 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SPATA7Q9P0W8 599 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ARMCX1Q9P291 453 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 RABL2AQ9UBK7 228 aaPredicted RBP3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 STYXL1Q9Y6J8 313 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 NSD2O96028 1365 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ATP10AO60312 1499 aa3.46□□□□□ -1.86
SRP54-AS1-203ENST00000556355 TRAV9-2A0A087WT02 112 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 A0A1B0GVL5 298 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ACOD1A6NK06 481 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CCT8L1PA6NM43 557 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 PP2D1A8MPX8 630 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 A8MX80 341 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 NOL4O94818 638 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CLDN9O95484 217 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SLC2A10O95528 541 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 IGHV3-13P01766 116 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 HOXD4P09016 255 aaPredicted RBP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 UQCRFS1P1P0C7P4 283 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 LAMP1P11279 417 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SFTPCP11686 197 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 PTBP1P26599 531 aaKnown RBP eCLIP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ANXA13P27216 316 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 GNA11P29992 359 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 NMT1P30419 496 aaKnown RBP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 UGT1A5P35504 534 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 HNRNPA3P51991 378 aaKnown RBP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 RPL32P62910 135 aaKnown RBP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 OGDHQ02218 1023 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 BST1Q10588 318 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SLC15A2Q16348 729 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 KLHL38Q2WGJ6 581 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 TRIM16LQ309B1 348 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 C6orf226Q5I0X4 101 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 LIPNQ5VXI9 398 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZNF343Q6P1L6 599 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZNF497Q6ZNH5 498 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 STXBP4Q6ZWJ1 553 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SLC47A2Q86VL8 602 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 OR4D9Q8NGE8 314 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZNF689Q96CS4 500 aaPredicted RBP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZNF599Q96NL3 588 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 OR5M11Q96RB7 305 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 VGLL1Q99990 258 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CHRDL1Q9BU40 450 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SLITRK2Q9H156 845 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 RHBGQ9H310 441 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 PAK1IP1Q9NWT1 392 aaPredicted RBP3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SLC2A8Q9NY64 477 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ONECUT1Q9UBC0 465 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 COPS3Q9UNS2 423 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 C3P01024 1663 aa3.45□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CDK13Q14004 1512 aaKnown RBP3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 ZFYVE16Q7Z3T8 1539 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SULT2B1O00204 365 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 FOXE1O00358 373 aaPredicted RBP3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 SAP18O00422 153 aaKnown RBP3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CXCL13O43927 109 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 OR10H3O60404 316 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CABYRO75952 493 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 DIRAS1O95057 198 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 AGTP01019 485 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 TROVE2P10155 538 aaKnown RBP eCLIP3.44□□□□□ -1.863e-56■■■■■ 242.6
SRP54-AS1-203ENST00000556355 POLR2EP19388 210 aaKnown RBP3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 HMGB2P26583 209 aaKnown RBP3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 FGF9P31371 208 aaPredicted RBP3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 CCR1P32246 355 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 EPHX2P34913 555 aa3.44□□□□□ -1.86
SRP54-AS1-203ENST00000556355 MAGEA9P43362 315 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms