RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SESN3P58005 492 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SIRPAP78324 504 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 MERTKQ12866 999 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 MYBPHQ13203 477 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF239Q16600 458 aaKnown RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 LIN52Q52LA3 116 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 MRPL2Q5T653 305 aaKnown RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 PRAMEF8Q5VWM4 474 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 PRAMEF7Q5VXH5 474 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 PPP4R4Q6NUP7 873 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 VWA1Q6PCB0 445 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 PLEKHM3Q6ZWE6 761 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 FAM214BQ7L5A3 538 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 LUZP2Q86TE4 346 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF563Q8TA94 476 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 RNF128Q8TEB7 428 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 TSPEARQ8WU66 669 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SLC25A43Q8WUT9 341 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 CNOT9Q92600 299 aaKnown RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 OSTF1Q92882 214 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 CPNE4Q96A23 557 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 STARD4Q96DR4 205 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 GMPPAQ96IJ6 420 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF559Q9BR84 538 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 MCCC2Q9HCC0 563 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 TIGARQ9NQ88 270 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 MRGBPQ9NV56 204 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 GALNT8Q9NY28 637 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 VAPAQ9P0L0 249 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SLAMF8Q9P0V8 285 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 LEF1Q9UJU2 399 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 CORO2BQ9UQ03 480 aa10.33□□□□□ -0.76
SLIRP-205ENST00000556310 SPIN1Q9Y657 262 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-205ENST00000556310 CSMD2Q7Z408 3487 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 A0A0G2JPF8 293 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CDHR4A6H8M9 788 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 A8MXE2 369 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 HNRNPCL2B2RXH8 293 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 HNRNPCL3B7ZW38 293 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 FAAHO00519 579 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ANGPT2O15123 496 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 HNRNPCL1O60812 293 aaKnown RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ADAM11O75078 769 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 SMNDC1O75940 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 PLGP00747 810 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 VIMP08670 466 aaKnown RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 PABPC4LP0CB38 370 aaKnown RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 HNRNPCL4P0DMR1 293 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CD8BP10966 210 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 UQCRBP14927 111 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CD1EP15812 388 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 RYKP34925 604 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 KIR2DL3P43628 341 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 PCYT1AP49585 367 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CARD18P57730 90 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 GUCY1A3Q02108 690 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ZSWIM7Q19AV6 140 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 TMEM176BQ3YBM2 270 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 RPS26P11Q5JNZ5 115 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 GCNT6Q5T4J0 391 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 RNF220Q5VTB9 566 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CGB2Q6NT52 195 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF836Q6ZNA1 936 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 GRINAQ7Z429 371 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 BTLAQ7Z6A9 289 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 DHDDSQ86SQ9 333 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF440Q8IYI8 595 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 DPP10Q8N608 796 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ATP6V1C2Q8NEY4 427 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 OR6K3Q8NGY3 331 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 OR52P1PQ8NH57 321 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 BBS10Q8TAM1 723 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 FAM222BQ8WU58 562 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 LURAP1Q96LR2 239 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CPPED1Q9BRF8 314 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CCDC106Q9BWC9 280 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 SRXN1Q9BYN0 137 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CACYBPQ9HB71 228 aaKnown RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 BCL2L10Q9HD36 194 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 SERINC1Q9NRX5 453 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 GLRX2Q9NS18 164 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CRIM1Q9NZV1 1036 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CHRNA9Q9UGM1 479 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 ZNF443Q9Y2A4 671 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-205ENST00000556310 NDUFAF1Q9Y375 327 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 EMC9Q9Y3B6 208 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 MPDZO75970 2070 aa10.32□□□□□ -0.76
SLIRP-205ENST00000556310 CCDC168Q8NDH2 2452 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 CFAP73A6NFT4 308 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 TUBAL3A6NHL2 446 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 C5orf58C9J3I9 102 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 AP3D1O14617 1153 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 CGAP01215 116 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 ARAFP10398 606 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 CPOXP36551 454 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 APOBEC1P41238 236 aaKnown RBP10.31□□□□□ -0.76
SLIRP-205ENST00000556310 HTR3AP46098 478 aa10.31□□□□□ -0.76
SLIRP-205ENST00000556310 ARFIP2P53365 341 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms