RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 C1orf50Q9BV19 199 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 CCDC106Q9BWC9 280 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 MTHFD2LQ9H903 347 aaPredicted RBP6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 FAIMQ9NVQ4 179 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 PARPBPQ9NWS1 579 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 EMC3Q9P0I2 261 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 GIMAP2Q9UG22 337 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 BTNL2Q9UIR0 455 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 KCNE5Q9UJ90 142 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 LAMP3Q9UQV4 416 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 WDR45Q9Y484 360 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 CADP27708 2225 aa6.9□□□□□ -1.3
PTCSC3-201ENST00000556013 JMJD1CQ15652 2540 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 NPIPA5A0A0B4J1W7 369 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 RNF103-CHMP3A0A140T963 221 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 DPRXA6NFQ7 191 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 NPIPA7E9PJI5 369 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 SMAD9O15198 467 aaKnown RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF208O43345 1280 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 KIAA0513O60268 411 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 EIF1BO60739 113 aaKnown RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 SKAP2O75563 359 aaPredicted RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 NPIPA8P0DM63 369 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 OR12D1P0DN82 309 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 CREB1P16220 341 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 GGT1P19440 569 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 COX5AP20674 150 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 PTAFRP25105 342 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC1A6P48664 564 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 PHC1P78364 1004 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 GNA13Q14344 377 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 PPA1Q15181 289 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 NRF1Q16656 503 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 GSTA3Q16772 222 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ZSWIM7Q19AV6 140 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 TYW3Q6IPR3 259 aaKnown RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 LRRC74BQ6ZQY2 392 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 DNM1P46Q6ZS02 220 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 C16orf62Q7Z3J2 963 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ADGRG3Q86Y34 549 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 TRIML2Q8N7C3 387 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF433Q8N7K0 673 aaPredicted RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF614Q8N883 585 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF781Q8N8C0 355 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 RFWD2Q8NHY2 731 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 PIGXQ8TBF5 258 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 RAB3IL1Q8TBN0 382 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 AGR3Q8TD06 166 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF524Q96C55 264 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 ROPN1LQ96C74 230 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 OTUB1Q96FW1 271 aaPredicted RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 BOD1Q96IK1 185 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 MUS81Q96NY9 551 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 TRNT1Q96Q11 434 aaKnown RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 OR5B2Q96R09 309 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 TRIM2Q9C040 744 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 OR51I1Q9H343 314 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 SERHL2Q9H4I8 314 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 CISD1Q9NZ45 108 aaKnown RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 CHRNA9Q9UGM1 479 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 MKLN1Q9UL63 735 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 NSD1Q96L73 2696 aaPredicted RBP6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
PTCSC3-201ENST00000556013 A0A1W2PP18 115 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TRIM64A6NGJ6 449 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TRIM64BA6NI03 449 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 OR5H1A6NKK0 313 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF716A6NP11 495 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SLCO1B7G3V0H7 640 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 RGS16O15492 202 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ITM2AO43736 263 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TLX2O43763 284 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 CRLF1O75462 422 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 H6PDO95479 791 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SOD3P08294 240 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 UBTFL6P0CB48 400 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 IGHV1-2P23083 117 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 S100A3P33764 101 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SOAT1P35610 550 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 CCR4P51679 360 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC18A1P54219 525 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 DSCR9P59020 149 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 MERTKQ12866 999 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 STX3Q13277 289 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TNK1Q13470 666 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 CHI3L2Q15782 390 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 MAPK14Q16539 360 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 CLEC12BQ2HXU8 276 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 PGGHGQ32M88 737 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 AGAP6Q5VW22 663 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ABLIM2Q6H8Q1 611 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 KLHL17Q6TDP4 642 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SEZ6L2Q6UXD5 910 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 FRRS1Q6ZNA5 592 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 Q71RC1 249 aaPredicted RBP6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 SPATA19Q7Z5L4 167 aa6.88□□□□□ -1.31
PTCSC3-201ENST00000556013 ZNF440Q8IYI8 595 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms