RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 C17orf47Q8NEP4 570 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 OR10G2Q8NGC3 310 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PSMA8Q8TAA3 256 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 CPT1CQ8TCG5 803 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GRHL3Q8TE85 626 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 XAGE5Q8WWM1 108 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 RASSF5Q8WWW0 418 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 MOAP1Q96BY2 351 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PPP1R14BQ96C90 147 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SNRNP40Q96DI7 357 aaKnown RBP9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SGCZQ96LD1 299 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 COL21A1Q96P44 957 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 OR7D2Q96RA2 312 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 TAAR6Q96RI8 345 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SIGLEC11Q96RL6 698 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 PIP5K1AQ99755 562 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 LMF2Q9BU23 707 aaKnown RBP9.02□□□□□ -0.97
PSEN1-213ENST00000555386 SERHL2Q9H4I8 314 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 GALNT9Q9HCQ5 603 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 TBC1D23Q9NUY8 699 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 ASF1BQ9NVP2 202 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 FBXO34Q9NWN3 711 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 NTMQ9P121 344 aa9.02□□□□□ -0.97
PSEN1-213ENST00000555386 FAM32AQ9Y421 112 aaKnown RBP9.02□□□□□ -0.97
PSEN1-213ENST00000555386 RELNP78509 3460 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 C17orf51A8MQB3 221 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 KLRC4-KLRK1H3BQV0 150 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 GNB5O14775 395 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TO15178 435 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 SCO2O43819 266 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 XPNPEP2O43895 674 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TSPAN2O60636 221 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 FAM20BO75063 409 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ICOSLGO75144 302 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 CLPXO76031 633 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 KCNK2O95069 426 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 NKX2-2O95096 273 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 CYP4B1P13584 511 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TCEA1P23193 301 aaKnown RBP9.01□□□□□ -0.97
PSEN1-213ENST00000555386 AQP1P29972 269 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 FMO3P31513 532 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 LIMS1P48059 325 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 MASP1P48740 699 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ENTPD1P49961 510 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 POU6F2P78424 691 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-213ENST00000555386 SPIBQ01892 262 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TLE1Q04724 770 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 LAPTM4AQ15012 233 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TOMM20Q15388 145 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 IGFBP7Q16270 282 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 OR5M10Q6IEU7 315 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 SLC16A12Q6ZSM3 486 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 C16orf62Q7Z3J2 963 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 HMGN2P46Q86SG4 172 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF605Q86T29 641 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF614Q8N883 585 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 GATSQ8NAP1 163 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF540Q8NDQ6 660 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 OR2M7Q8NG81 312 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TRUB1Q8WWH5 349 aaKnown RBP9.01□□□□□ -0.97
PSEN1-213ENST00000555386 SGCDQ92629 289 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 DGCR6LQ9BY27 220 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 CCDC90BQ9GZT6 254 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 TRIM45Q9H8W5 580 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF556Q9HAH1 456 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 EXD2Q9NVH0 621 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ERVK-18Q9QC07 812 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 MRTO4Q9UKD2 239 aaKnown RBP9.01□□□□□ -0.97
PSEN1-213ENST00000555386 CHCHD2Q9Y6H1 151 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-213ENST00000555386 ENPP4Q9Y6X5 453 aa9.01□□□□□ -0.97
PSEN1-213ENST00000555386 PRAMEF25A6NGN4 478 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 C5orf58C9J3I9 102 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 NPIPA5E9PKD4 350 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 TFECO14948 347 aaPredicted RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 ZNHIT1O43257 154 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 MPZL2O60487 215 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 CDC40O60508 579 aaKnown RBP eCLIP9□□□□□ -0.97
PSEN1-213ENST00000555386 BCAS1O75363 584 aaPredicted RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 WBP4O75554 376 aaKnown RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 WISP2O76076 250 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 INMTO95050 263 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 UTS2O95399 124 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 IFNW1P05000 195 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 IFI6P09912 130 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 ZNF182P17025 639 aaPredicted RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 CNR1P21554 472 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 CASP3P42574 277 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 KHKP50053 298 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 PPIAP62937 165 aaKnown RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 ALDH6A1Q02252 535 aaKnown RBP9□□□□□ -0.97
PSEN1-213ENST00000555386 EFR3AQ14156 821 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 CTF1Q16619 201 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 GPAT3Q53EU6 434 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 DCST2Q5T1A1 773 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 UBE2UQ5VVX9 321 aa9□□□□□ -0.97
PSEN1-213ENST00000555386 ZCCHC12Q6PEW1 402 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms