RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 STAMBPO95630 424 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 THRBP10828 461 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF708P17019 499 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 CLK1P49759 484 aaKnown RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 POLR2HP52434 150 aaKnown RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 CLDN15P56746 228 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 CLDN18P56856 261 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 HSF1Q00613 529 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 MERTKQ12866 999 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 SELENBP1Q13228 472 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 GXYLT1Q4G148 440 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ENTPD8Q5MY95 495 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 LINC00114Q6XXX2 140 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 PIWIL3Q7Z3Z3 882 aaKnown RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ATG4DQ86TL0 474 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 TSPYL5Q86VY4 417 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 VANGL1Q8TAA9 524 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-219ENST00000555323 FAM57AQ8TBR7 257 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ADAMTS16Q8TE57 1224 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 SLC38A4Q969I6 547 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 C3orf49Q96BT1 292 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 WDYHV1Q96HA8 205 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 LRGUKQ96M69 825 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 TRIM15Q9C019 465 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 MAGIXQ9H6Y5 334 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 EXO5Q9H790 373 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 IL1RAPQ9NPH3 570 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 CTPS2Q9NRF8 586 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 SERINC1Q9NRX5 453 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 NDUFAF4Q9P032 175 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ACAD8Q9UKU7 415 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 A4GNTQ9UNA3 340 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 SHANK1Q9Y566 2161 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 FREM3P0C091 2139 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF407Q9C0G0 2248 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 A0A087WUJ7 227 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 TCRBV3S1A0A5B6 114 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 AHRRA9YTQ3 701 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 NPIPA2E9PIF3 369 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 NPIPA3F8WFD2 350 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 PRSS23O95084 383 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 LYPD3O95274 346 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 THY1P04216 161 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 IFNW1P05000 195 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 PNMTP11086 282 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 HOXB6P17509 224 aaKnown RBP11.43□□□□□ -0.58
SYNE2-219ENST00000555323 IL11P20809 199 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 STARP49675 285 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 RBPJQ06330 500 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 FLOT2Q14254 428 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 EMC4Q5J8M3 183 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 WLSQ5T9L3 541 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 PM20D2Q8IYS1 436 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 LILRA2Q8N149 483 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 CADM2Q8N3J6 435 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 SLC25A43Q8WUT9 341 aaPredicted RBP11.43□□□□□ -0.58
SYNE2-219ENST00000555323 SLC47A1Q96FL8 570 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 CHRNA9Q9UGM1 479 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 ENPP4Q9Y6X5 453 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 DNAJC13O75165 2243 aa11.43□□□□□ -0.58
SYNE2-219ENST00000555323 TMED7-TICAM2A0A0A6YYA0 188 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 TRAPPC13A5PLN9 417 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 GJE1A6NN92 205 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 H3BML4 177 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 FFAR1O14842 300 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 CHP2O43745 196 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 SLC19A2O60779 497 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 NPIPB7O75200 414 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 OR5F1O95221 314 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 HOXD4P09016 255 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ITGA2P17301 1181 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 RHCEP18577 417 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 TCEA1P23193 301 aaKnown RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 CXCR1P25024 350 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 PTGER4P35408 488 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 MAGEA2P43356 314 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 SUCLG1P53597 346 aaKnown RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 CDH12P55289 794 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 VLDLRP98155 873 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 CTU2Q2VPK5 515 aaKnown RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ALG10BQ5I7T1 473 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 DCST1Q5T197 706 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 C3orf33Q6P1S2 294 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ESPNLQ6ZVH7 1005 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 PRICKLE2Q7Z3G6 844 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ADGRE4PQ86SQ3 457 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 GGNQ86UU5 652 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ZPLD1Q8TCW7 415 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 MPP4Q96JB8 637 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ADGRG7Q96K78 797 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 PRRC1Q96M27 445 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF300Q96RE9 604 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 PRSS27Q9BQR3 290 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF426Q9BUY5 554 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 POTEKPQ9BYX7 375 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 TNFRSF10DQ9UBN6 386 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms