RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 NCKAP5O14513 1909 aa4.23□□□□□ -1.73
ATXN3-229ENST00000554672 MED12Q93074 2177 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 OR5H1A6NKK0 313 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 DNALI1O14645 258 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TNFSF11O14788 317 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PHGDHO43175 533 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PLOD3O60568 738 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 NME6O75414 186 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 LYZL6O75951 148 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 LY6HO94772 140 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CLDN9O95484 217 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 IL33O95760 270 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 NUDT3O95989 172 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 OPN1LWP04000 364 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 GYPEP15421 78 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 STMN1P16949 149 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ME2P23368 584 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PSMA4P25789 261 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CXCR5P32302 372 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 OR3A2P47893 321 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CHN2P52757 468 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PSMD4P55036 377 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 MANFP55145 182 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TRA2BP62995 288 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PSG6Q00889 435 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 DUSP2Q05923 314 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 LGALS3BPQ08380 585 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TRIM25Q14258 630 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 MORF4L2Q15014 288 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ACAP2Q15057 778 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PPP1R7Q15435 360 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 LTB4RQ15722 352 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CARTPTQ16568 116 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 DECR1Q16698 335 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ARL13AQ5H913 290 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 Q6YL49 198 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 DEF8Q6ZN54 512 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 USP43Q70EL4 1123 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TRABD2AQ86V40 505 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 GAS2L3Q86XJ1 694 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 SAMD14Q8IZD0 417 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 SLC43A2Q8N370 569 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 METTL4Q8N3J2 472 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 L3MBTL4Q8NA19 623 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 SEMA6DQ8NFY4 1073 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 FAM110BQ8TC76 370 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ACTRT2Q8TDY3 377 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 RNF128Q8TEB7 428 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ABHD3Q8WU67 409 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 EXT2Q93063 718 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CPNE4Q96A23 557 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 KLHL29Q96CT2 875 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 MTBPQ96DY7 904 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CNRIP1Q96F85 164 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 KLHL15Q96M94 604 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 NAP1L3Q99457 506 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 RBM4Q9BWF3 364 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 FAIM2Q9BWQ8 316 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 RTN4RQ9BZR6 473 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TOR3AQ9H497 397 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 SERHL2Q9H4I8 314 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ALG9Q9H6U8 611 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 FKRPQ9H9S5 495 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 NMRAL1Q9HBL8 299 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 MYNNQ9NPC7 610 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 NPAP1Q9NZP6 1156 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 PRSS50Q9UI38 385 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 UTS2RQ9UKP6 389 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 CHMP2BQ9UQN3 213 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 VDAC3Q9Y277 283 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 MTO1Q9Y2Z2 717 aaKnown RBP4.22□□□□□ -1.73
ATXN3-229ENST00000554672 RNF11Q9Y3C5 154 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 TEX264Q9Y6I9 313 aa4.22□□□□□ -1.73
ATXN3-229ENST00000554672 ALPK2Q86TB3 2170 aa4.21□□□□□ -1.73
ATXN3-229ENST00000554672 MGAM2Q2M2H8 2515 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 A0A1W2PRB8 838 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 GJE1A6NN92 205 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 SYCE1LA8MT33 242 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 SUPT3HB4E1H0 165 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 UBXN8O00124 270 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 KERAO60938 352 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 SUPT3HO75486 399 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 NCR1O76036 304 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 ANGPTL1O95841 491 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 LTA4HP09960 611 aaKnown RBP4.21□□□□□ -1.74
ATXN3-229ENST00000554672 MPIP34949 423 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 EIF1P41567 113 aaKnown RBP4.21□□□□□ -1.74
ATXN3-229ENST00000554672 PIK3CGP48736 1102 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 ALDH9A1P49189 494 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 FNTAP49354 379 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 ZNF83P51522 516 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 DVL1P1P54792 670 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-229ENST00000554672 RAB10P61026 200 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 GTF2H2Q13888 395 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 ZKSCAN8Q15776 578 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-229ENST00000554672 ZNF239Q16600 458 aaKnown RBP4.21□□□□□ -1.74
ATXN3-229ENST00000554672 ZSWIM7Q19AV6 140 aa4.21□□□□□ -1.74
ATXN3-229ENST00000554672 MST1LQ2TV78 715 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms