RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RETP07949 1114 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SBK2P0C263 348 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 CD36P16671 472 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PRDX4Q13162 271 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 CCNJQ5T5M9 372 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 FIGLAQ6QHK4 219 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 TOMM5Q8N4H5 51 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 FBXL20Q96IG2 436 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 HOPXQ9BPY8 73 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 GALNT9Q9HCQ5 603 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 RPS10P5Q9NQ39 176 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PPP1R3CQ9UQK1 317 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ANTXRLA6NF34 631 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 NDST3O95803 873 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 VASNQ6EMK4 673 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 NDUFAF7Q7L592 441 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 YRDCQ86U90 279 aaKnown RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 LINC00052Q96N35 136 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF576Q9H609 170 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ABRACLQ9P1F3 81 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 EXTL2Q9UBQ6 330 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 CA12O43570 354 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ESPNLQ6ZVH7 1005 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 GALNT16Q8N428 558 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 BANPQ8N9N5 519 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 BEST4Q8NFU0 473 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 FAXDC2Q96IV6 333 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 LRRC4CQ9HCJ2 640 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM45AQ9NWC5 275 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 TAS2R7Q9NYW3 318 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PTPN13Q12923 2485 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 A0A0B4J2A0 478 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 HACD1B0YJ81 288 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 MANBAO00462 879 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 HDAC3O15379 428 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SEMA4FO95754 770 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PRKACBP22694 351 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SLC18A1P54219 525 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 DAG1Q14118 895 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF788Q6ZQV5 615 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 COX15Q7KZN9 410 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SYT13Q7L8C5 426 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SLC5A11Q8WWX8 675 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 CAMK1GQ96NX5 476 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SHPKQ9UHJ6 478 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SETBP1Q9Y6X0 1596 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 NUP98P52948 1817 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PIM1P11309 404 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PCSK2P16519 638 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PITPNBP48739 271 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ACSM3Q53FZ2 586 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ABHD13Q7L211 337 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF551Q7Z340 670 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF679Q8IYX0 411 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 BEND2Q8NDZ0 799 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PARP4Q9UKK3 1724 aaKnown RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 UNCXA6NJT0 531 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PATE3B3GLJ2 98 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 KRBOX1C9JBD0 128 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 CXCL11O14625 94 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 OR8U9P0C7N5 309 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 GRIA2P42262 883 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 BLKP51451 505 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF83P51522 516 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 NSDHLQ15738 373 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 NADK2Q4G0N4 442 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 AVPI1Q5T686 147 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ARHGAP11AQ6P4F7 1023 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 OR56A1Q8NGH5 318 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SMPD3Q9NY59 655 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 YBX2Q9Y2T7 364 aaKnown RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 V9GYS6 101 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 FAM181BA6NEQ2 426 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 KLK10O43240 276 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PRR5P85299 388 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 SOX4Q06945 474 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 GPNMBQ14956 572 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 RAB11BQ15907 218 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PDK4Q16654 411 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 CDCA2Q69YH5 1023 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ACOT11Q8WXI4 607 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 RFKQ969G6 155 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ISG20Q96AZ6 181 aaKnown RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.1□□□□□ -1.91
SYNE2-212ENST00000554584 NTNG1Q9Y2I2 539 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 UFC1Q9Y3C8 167 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 PCDHGA5Q9Y5G8 931 aa3.1□□□□□ -1.91
SYNE2-212ENST00000554584 ADRB3P13945 408 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CRHR1P34998 444 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 C16orf47Q6ZP98 133 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 KLHDC9Q8NEP7 349 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 HOXB13Q92826 284 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 HSH2DQ96JZ2 352 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 MMP27Q9H306 513 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 HRH4Q9H3N8 390 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 NOX3Q9HBY0 568 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 A0A1B0GVM2 712 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC5A2P31639 672 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GPR176Q14439 515 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms