RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 TMEM176BQ3YBM2 270 aaPredicted RBP25.53■■□□□ 1.68
PCNX1-206ENST00000554292 INTS11Q5TA45 600 aaKnown RBP25.53■■□□□ 1.68
PCNX1-206ENST00000554292 ARPINQ7Z6K5 226 aa25.53■■□□□ 1.68
PCNX1-206ENST00000554292 ATP6V1C2Q8NEY4 427 aa25.53■■□□□ 1.68
PCNX1-206ENST00000554292 CMTM5Q96DZ9 223 aa25.53■■□□□ 1.68
PCNX1-206ENST00000554292 LRRC46Q96FV0 321 aa25.53■■□□□ 1.68
PCNX1-206ENST00000554292 ZNF845Q96IR2 970 aaPredicted RBP25.53■■□□□ 1.68
PCNX1-206ENST00000554292 MYLK2Q9H1R3 596 aa25.53■■□□□ 1.68
PCNX1-206ENST00000554292 ARL2BPQ9Y2Y0 163 aa25.53■■□□□ 1.68
PCNX1-206ENST00000554292 NKX2-6A6NCS4 301 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 AP3D1O14617 1153 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 EFNA2O43921 213 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 CXCL13O43927 109 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 TGM6O95932 706 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 PPP4R4Q6NUP7 873 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 POMZP3Q6PJE2 187 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 DHRS4L2Q6PKH6 230 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 ZZZ3Q8IYH5 903 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 CLIP4Q8N3C7 705 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 FNDC9Q8TBE3 224 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 FIG4Q92562 907 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 ZNF524Q96C55 264 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 INTS12Q96CB8 462 aaKnown RBP25.52■■□□□ 1.68
PCNX1-206ENST00000554292 UCK2Q9BZX2 261 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 AP3M1Q9Y2T2 418 aa25.52■■□□□ 1.68
PCNX1-206ENST00000554292 ADAM11O75078 769 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 AQP1P29972 269 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 PCGF2P35227 344 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 SLC1A3P43003 542 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 CARD18P57730 90 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 RABL3Q5HYI8 236 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 SP5Q6BEB4 398 aaPredicted RBP25.51■■□□□ 1.67
PCNX1-206ENST00000554292 PLXDC2Q6UX71 529 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 PIGWQ7Z7B1 504 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 ARMC8Q8IUR7 673 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 LIX1LQ8IVB5 337 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 GCNT2Q8N0V5 402 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 OSTF1Q92882 214 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 CPNE4Q96A23 557 aaPredicted RBP25.51■■□□□ 1.67
PCNX1-206ENST00000554292 REXO5Q96IC2 774 aaKnown RBP25.51■■□□□ 1.67
PCNX1-206ENST00000554292 EVA1AQ9H8M9 152 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 EFCAB1Q9HAE3 211 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 CTPS2Q9NRF8 586 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 CHRNA9Q9UGM1 479 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 SLC13A4Q9UKG4 626 aa25.51■■□□□ 1.67
PCNX1-206ENST00000554292 GKN3PP0CG01 181 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 COL8A1P27658 744 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 GRNP28799 593 aaKnown RBP25.5■■□□□ 1.67
PCNX1-206ENST00000554292 SHC1P29353 583 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 PRDX6P30041 224 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 POLR2HP52434 150 aaKnown RBP25.5■■□□□ 1.67
PCNX1-206ENST00000554292 MAP2K6P52564 334 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 PCBP3P57721 371 aaKnown RBP25.5■■□□□ 1.67
PCNX1-206ENST00000554292 VMACQ2NL98 169 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 SYT14P1Q58G82 188 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 ERICH5Q6P6B1 374 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 PATL1Q86TB9 770 aaKnown RBP25.5■■□□□ 1.67
PCNX1-206ENST00000554292 RNF122Q9H9V4 155 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 KLHL28Q9NXS3 571 aa25.5■■□□□ 1.67
PCNX1-206ENST00000554292 SETXQ7Z333 2677 aaKnown RBP25.49■■□□□ 1.67
PCNX1-206ENST00000554292 AIM2O14862 343 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 DCTN3O75935 186 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 ASCL1P50553 236 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 WBP2NLQ6ICG8 309 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 TREML1Q86YW5 311 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 RELL2Q8NC24 303 aaPredicted RBP25.49■■□□□ 1.67
PCNX1-206ENST00000554292 FAM53CQ9NYF3 392 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 CHST2Q9Y4C5 530 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 PKDREJQ9NTG1 2253 aa25.49■■□□□ 1.67
PCNX1-206ENST00000554292 ACAA2P42765 397 aaKnown RBP25.48■■□□□ 1.67
PCNX1-206ENST00000554292 CLK1P49759 484 aaKnown RBP25.48■■□□□ 1.67
PCNX1-206ENST00000554292 GTF2IRD2BQ6EKJ0 949 aa25.48■■□□□ 1.67
PCNX1-206ENST00000554292 GTF2IRD2Q86UP8 949 aa25.48■■□□□ 1.67
PCNX1-206ENST00000554292 CALHM3Q86XJ0 350 aa25.48■■□□□ 1.67
PCNX1-206ENST00000554292 OR5B2Q96R09 309 aa25.48■■□□□ 1.67
PCNX1-206ENST00000554292 PIGMQ9H3S5 423 aa25.48■■□□□ 1.67
PCNX1-206ENST00000554292 COQ10BQ9H8M1 238 aa25.48■■□□□ 1.67
PCNX1-206ENST00000554292 TMED7-TICAM2A0A0A6YYA0 188 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 A0A1W2PNV4 684 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 TFPIP10646 304 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 TACR3P29371 465 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 GZMMP51124 257 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 TFF3Q07654 80 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 FOXF2Q12947 444 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 ZNF239Q16600 458 aaKnown RBP25.47■■□□□ 1.67
PCNX1-206ENST00000554292 HACD2Q6Y1H2 254 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 MCEMP1Q8IX19 187 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 CADM2Q8N3J6 435 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 HOPXQ9BPY8 73 aaPredicted RBP25.47■■□□□ 1.67
PCNX1-206ENST00000554292 PIF1Q9H611 641 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 GLRX2Q9NS18 164 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 FOXD3Q9UJU5 478 aaPredicted RBP25.47■■□□□ 1.67
PCNX1-206ENST00000554292 OSGIN1Q9UJX0 560 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 TMED7Q9Y3B3 224 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 MPDZO75970 2070 aa25.47■■□□□ 1.67
PCNX1-206ENST00000554292 EEF1E1-BLOC1S5C9J1V9 151 aa25.46■■□□□ 1.67
PCNX1-206ENST00000554292 EEF1E1O43324 174 aaKnown RBP25.46■■□□□ 1.67
PCNX1-206ENST00000554292 AQP8O94778 261 aa25.46■■□□□ 1.67
PCNX1-206ENST00000554292 MFN2O95140 757 aa25.46■■□□□ 1.67
PCNX1-206ENST00000554292 PLGP00747 810 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms