RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR8J2Q8NGG1 315 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 APOBEC4Q8WW27 367 aaKnown RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 CMTM7Q96FZ5 175 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 APIPQ96GX9 242 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 NECAB3Q96P71 396 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 ATG101Q9BSB4 218 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 GLIS2Q9BZE0 524 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 NRSN2Q9GZP1 204 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 BCO1Q9HAY6 547 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 FBXW2Q9UKT8 454 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 TNFSF18Q9UNG2 199 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 FAM96BQ9Y3D0 163 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 SIRT4Q9Y6E7 314 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 ANKRD20A5PA0PJZ0 165 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 RNF222A6NCQ9 220 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 YJEFN3A6XGL0 299 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 PYCARD-AS1I3L0S3 204 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 SULT2B1O00204 365 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ZNF749O43361 778 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 MOSPD3O75425 235 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 RAB3DO95716 219 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ATF1P18846 271 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 LMO2P25791 158 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 OR2B8PP59922 312 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 RAP1AP62834 184 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 CDK5Q00535 292 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 SCARB2Q14108 478 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ARHGEF7Q14155 803 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 TEAD2Q15562 447 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ZNF750Q32MQ0 723 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 COX20Q5RI15 118 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ARMC12Q5T9G4 340 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ANXA8L1Q5VT79 327 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 TPGS2Q68CL5 300 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 KIAA1211LQ6NV74 962 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 LINGO4Q6UY18 593 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 ZNF574Q6ZN55 896 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 PRSS58Q8IYP2 241 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 OR52I2Q8NH67 350 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 NFKBIDQ8NI38 313 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 STOML3Q8TAV4 291 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 KCTD13Q8WZ19 329 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 CPNE2Q96FN4 548 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 TCTN2Q96GX1 697 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 F2RL3Q96RI0 385 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 NDUFAF3Q9BU61 184 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 FAM86C1Q9NVL1 165 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 GDF2Q9UK05 429 aaPredicted RBP8.87□□□□□ -0.99
SIX4-202ENST00000554079 MAP4K5Q9Y4K4 846 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 PPP2R3BQ9Y5P8 575 aa8.87□□□□□ -0.99
SIX4-202ENST00000554079 UTRNP46939 3433 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 PLXNB3Q9ULL4 1909 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3DA0A087WVF3 549 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3IA0A087WXS9 549 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3EA0A087X179 549 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3KA0A087X1G2 549 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TRBC2A0A5B9 178 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3FA6NER0 549 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 ZNF705EA8MWA4 302 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3LB9A6J9 549 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 NPIPB8E9PQR5 432 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 RPL36A-HNRNPH2H7BZ11 118 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 H7C1Q1 480 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 FAAHO00519 579 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 FADS1O60427 444 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 IGHA1P01876 353 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 FGBP02675 491 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 LINC00614P0C842 121 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 DPEP1P16444 411 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 PRPS1L1P21108 318 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 AKR1C3P42330 323 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 MAGEB1P43366 347 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 SLC6A11P48066 632 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 ELAVL1Q15717 326 aaKnown RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 NDUFA9Q16795 377 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 ADGRF1Q5T601 910 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 OR10K2Q6IF99 312 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3CQ6IPX1 549 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 FAAP20Q6NZ36 180 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 PAPD4Q6PIY7 484 aaKnown RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 ZNF322Q6U7Q0 402 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 DPPA4Q7L190 304 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TBC1D3Q8IZP1 549 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 MUC20Q8N307 709 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 BEND2Q8NDZ0 799 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 PAQR8Q8TEZ7 354 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 UBTD2Q8WUN7 234 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 MRPS31Q92665 395 aaKnown RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 BSCL2Q96G97 398 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 MTERF1Q99551 399 aaKnown RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 ULBP1Q9BZM6 244 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 PTGES2Q9H7Z7 377 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 TLR8Q9NR97 1041 aaKnown RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 TDP1Q9NUW8 608 aa8.86□□□□□ -0.99
SIX4-202ENST00000554079 UXTQ9UBK9 157 aaPredicted RBP8.86□□□□□ -0.99
SIX4-202ENST00000554079 DNAJB11Q9UBS4 358 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms