RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 MTIF3Q9H2K0 278 aaKnown RBP11.36□□□□□ -0.59
SHMT2-207ENST00000553837 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TMEM74BQ9NUR3 256 aa11.36□□□□□ -0.59
SHMT2-207ENST00000553837 TRBV23OR9-2A0A075B6M9 112 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 C2orf92A0A1B0GVN3 265 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 APOL3O95236 402 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SYPP08247 313 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CELP19835 753 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 NPR2P20594 1047 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 AHRP35869 848 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 BUD31P41223 144 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 MTNR1BP49286 362 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CDK5Q00535 292 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 ACSM1Q08AH1 577 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SHHQ15465 462 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 MINDY4Q4G0A6 757 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 HBMQ6B0K9 141 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 FAM198BQ6UWH4 519 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 TMEM64Q6YI46 380 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 BTN2A1Q7KYR7 527 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 NLRC3Q7RTR2 1065 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 MFSD9Q8NBP5 474 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 OR1E3Q8WZA6 343 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 HSD17B8Q92506 261 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 KAT2AQ92830 837 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 FGF11Q92914 225 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SCARF2Q96GP6 870 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 ARL5BQ96KC2 179 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 FNDC11Q9BVV2 318 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SARGQ9BW04 601 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 C1QTNF6Q9BXI9 259 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 PLA2G12AQ9BZM1 189 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 EQTNQ9NQ60 294 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SDHAF3Q9NRP4 125 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CYB5R1Q9UHQ9 305 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SPATA2Q9UM82 520 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 F5P12259 2224 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 MYO9BQ13459 2157 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 PRSS38A1L453 326 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CD8B2A6NJW9 211 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CACNB4O00305 520 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 NUPL2O15504 423 aaKnown RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SOX30O94993 753 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 ASGR2P07307 311 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CD8BP10966 210 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 LAMP2P13473 410 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SOX18P35713 384 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SLC1A3P43003 542 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SRP9P49458 86 aaKnown RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 TSPAN5P62079 268 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 TFF2Q03403 129 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 LHFPL3Q86UP9 236 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 VRK2Q86Y07 508 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 LINC00471Q8N535 108 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 OR56B4Q8NH76 319 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 BBS10Q8TAM1 723 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 ELSPBP1Q96BH3 223 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 OR7D2Q96RA2 312 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 RAB11FIP5Q9BXF6 653 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SAP130Q9H0E3 1048 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 SLC38A1Q9H2H9 487 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 CDCP1Q9H5V8 836 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 BRD7Q9NPI1 651 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF275Q9NSD4 429 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-207ENST00000553837 DZANK1Q9NVP4 752 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 NTNG1Q9Y2I2 539 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 TICRRQ7Z2Z1 1910 aa11.35□□□□□ -0.59
SHMT2-207ENST00000553837 TRAV20A0A0B4J274 112 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 TOXO94900 526 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 EIF4EP06730 217 aaKnown RBP11.34□□□□□ -0.59
SHMT2-207ENST00000553837 PPP2R1BP30154 601 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 BTN3A2P78410 334 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 MAP4K2Q12851 820 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 GRM7Q14831 915 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 TMEM31Q5JXX7 168 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 PAQR7Q86WK9 346 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 CMIPQ8IY22 773 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 MOSPD2Q8NHP6 518 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 RPLP0P6Q8NHW5 317 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 SFXN5Q8TD22 340 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 ELP4Q96EB1 424 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 NPAS1Q99742 590 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
SHMT2-207ENST00000553837 EGLN3Q9H6Z9 239 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 METTL17Q9H7H0 456 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-207ENST00000553837 KIR3DX1Q9H7L2 352 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 A0A087WUU8 490 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 LRRC72A6NJI9 287 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 HNRNPCL2B2RXH8 293 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 FCMRO60667 390 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 CSNK2A2P19784 350 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-207ENST00000553837 TNFRSF4P43489 277 aa11.34□□□□□ -0.59
SHMT2-207ENST00000553837 AKR1D1P51857 326 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms