RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 A4GALTQ9NPC4 353 aa7.35□□□□□ -1.23
RDH11-205ENST00000553816 CTPS2Q9NRF8 586 aa7.35□□□□□ -1.23
RDH11-205ENST00000553816 ARMCX1Q9P291 453 aa7.35□□□□□ -1.23
RDH11-205ENST00000553816 ZNF629Q9UEG4 869 aaPredicted RBP7.35□□□□□ -1.23
RDH11-205ENST00000553816 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.35□□□□□ -1.23
RDH11-205ENST00000553816 USP22Q9UPT9 525 aa7.35□□□□□ -1.23
RDH11-205ENST00000553816 ZNF443Q9Y2A4 671 aaPredicted RBP7.35□□□□□ -1.23
RDH11-205ENST00000553816 SLC35A3Q9Y2D2 325 aa7.35□□□□□ -1.23
RDH11-205ENST00000553816 GPC6Q9Y625 555 aaPredicted RBP7.35□□□□□ -1.23
RDH11-205ENST00000553816 SPTBN1Q01082 2364 aaKnown RBP7.35□□□□□ -1.23
RDH11-205ENST00000553816 HECTD1Q9ULT8 2610 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 LRRK2Q5S007 2527 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 A0A0G2JPF8 293 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 LOC100653049A0A140TA62 436 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 A0A1W2PNV4 684 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 SLC22A20A6NK97 555 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 HNRNPCL2B2RXH8 293 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 HNRNPCL3B7ZW38 293 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 FXYD1O00168 92 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 DVL2O14641 736 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ADAMDEC1O15204 470 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 TPST1O60507 370 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 HNRNPCL1O60812 293 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 GCM2O75603 506 aaPredicted RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 TNFSF13O75888 250 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 KRT34O76011 436 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 PGM3O95394 542 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 HNRNPCL4P0DMR1 293 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 PGCP20142 388 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 DRD4P21917 467 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ELK4P28324 431 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 EIF1P41567 113 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 ACAA2P42765 397 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 MAGEA8P43361 318 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 KIR2DL2P43627 348 aaPredicted RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 IDH2P48735 452 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 GZMMP51124 257 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 RPS3AP61247 264 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 CDK6Q00534 326 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 MERTKQ12866 999 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 NFYCQ13952 458 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 SF3B4Q15427 424 aaKnown RBP eCLIP7.34□□□□□ -1.23
RDH11-205ENST00000553816 GUSBP1Q15486 140 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 SGCBQ16585 318 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 TMEM176BQ3YBM2 270 aaPredicted RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 GCNT6Q5T4J0 391 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 HBMQ6B0K9 141 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 REP15Q6BDI9 236 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 NANOGP8Q6NSW7 305 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 PPP4R4Q6NUP7 873 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 MEX3BQ6ZN04 569 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 ESPNLQ6ZVH7 1005 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 P4HA3Q7Z4N8 544 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 SNX32Q86XE0 403 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ADGRG3Q86Y34 549 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 TREML1Q86YW5 311 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 PEX5LQ8IYB4 626 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 POU5F2Q8N7G0 328 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 OR2V1Q8NHB1 315 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ZNF563Q8TA94 476 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 TSPEARQ8WU66 669 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 OIT3Q8WWZ8 545 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ROBO4Q8WZ75 1007 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ST8SIA1Q92185 356 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 OSTF1Q92882 214 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 STARD4Q96DR4 205 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 TM9SF2Q99805 663 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 ELAC2Q9BQ52 826 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 WFDC6Q9BQY6 131 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 CCDC106Q9BWC9 280 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 RAD21L1Q9H4I0 556 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 TMEM38AQ9H6F2 299 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 NANOGQ9H9S0 305 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 RNF122Q9H9V4 155 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 HHATLQ9HCP6 504 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 CHST11Q9NPF2 352 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 EXOSC3Q9NQT5 275 aaKnown RBP7.34□□□□□ -1.23
RDH11-205ENST00000553816 ACER3Q9NUN7 267 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 CALML5Q9NZT1 146 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 JKAMPQ9P055 326 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 CLEC4AQ9UMR7 237 aa7.34□□□□□ -1.23
RDH11-205ENST00000553816 FREM1Q5H8C1 2179 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 IGHV3-15A0A0B4J1V0 119 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 ZC3H12DA2A288 527 aaKnown RBP7.33□□□□□ -1.24
RDH11-205ENST00000553816 CDHR4A6H8M9 788 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 EVPLLA8MZ36 301 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 HNRNPRO43390 633 aaKnown RBP7.33□□□□□ -1.24
RDH11-205ENST00000553816 IL18BPO95998 194 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 PABPC4LP0CB38 370 aaKnown RBP7.33□□□□□ -1.24
RDH11-205ENST00000553816 CCNA2P20248 432 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 PPIBP23284 216 aaKnown RBP7.33□□□□□ -1.24
RDH11-205ENST00000553816 AQP1P29972 269 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 LSP1P33241 339 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 OPRM1P35372 400 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 ASCL1P50553 236 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 EEFSECP57772 596 aaKnown RBP7.33□□□□□ -1.24
RDH11-205ENST00000553816 SIRPAP78324 504 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 HOXC5Q00444 222 aa7.33□□□□□ -1.24
RDH11-205ENST00000553816 DMTNQ08495 405 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms