RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 PLGP00747 810 aaPredicted RBP21.16■□□□□ 0.98
TDP1-205ENST00000553527 BMP2P12643 396 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 ADH6P28332 368 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 PGM1P36871 562 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 KIR2DL2P43627 348 aaPredicted RBP21.16■□□□□ 0.98
TDP1-205ENST00000553527 CARD18P57730 90 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 EEF1A1P68104 462 aaKnown RBP21.16■□□□□ 0.98
TDP1-205ENST00000553527 KCNJ10P78508 379 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 CYP51A1Q16850 503 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 EEF1A1P5Q5VTE0 462 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 BTLAQ7Z6A9 289 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 KIF18BQ86Y91 864 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 C10orf111Q8N326 155 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 ADGRG7Q96K78 797 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 MRGPRX4Q96LA9 322 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 A4GALTQ9NPC4 353 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 GALNT8Q9NY28 637 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 SLC35A3Q9Y2D2 325 aa21.16■□□□□ 0.98
TDP1-205ENST00000553527 A8MXE2 369 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 BCHEP06276 602 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 CRHP06850 196 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 GUSBP08236 651 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 NUDT7P0C024 238 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 MNAT1P51948 309 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 GNA13Q14344 377 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 RABL3Q5HYI8 236 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 LRRC74BQ6ZQY2 392 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 ZNF563Q8TA94 476 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 ROBO4Q8WZ75 1007 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 NSL1Q96IY1 281 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 HOPXQ9BPY8 73 aaPredicted RBP21.15■□□□□ 0.98
TDP1-205ENST00000553527 OPN3Q9H1Y3 402 aaPredicted RBP21.15■□□□□ 0.98
TDP1-205ENST00000553527 SLC38A1Q9H2H9 487 aa21.15■□□□□ 0.98
TDP1-205ENST00000553527 KAT8Q9H7Z6 458 aaKnown RBP21.15■□□□□ 0.98
TDP1-205ENST00000553527 MTHFD2LQ9H903 347 aaPredicted RBP21.15■□□□□ 0.98
TDP1-205ENST00000553527 PAQR5Q9NXK6 330 aaPredicted RBP21.15■□□□□ 0.98
TDP1-205ENST00000553527 CSMD2Q7Z408 3487 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 C5orf58C9J3I9 102 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 FCGR2AP12318 317 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 PGCP20142 388 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 SLC6A2P23975 617 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 PEX19P40855 299 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 SESN3P58005 492 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 MXRA7P84157 204 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 SLC38A5Q8WUX1 472 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 MAL2Q969L2 176 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 TMEM19Q96HH6 336 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 GPATCH1Q9BRR8 931 aaKnown RBP21.14■□□□□ 0.97
TDP1-205ENST00000553527 CALML5Q9NZT1 146 aa21.14■□□□□ 0.97
TDP1-205ENST00000553527 GJE1A6NN92 205 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 TFPTP0C1Z6 253 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 ARAFP10398 606 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 IL7RP16871 459 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 CALB2P22676 271 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 ELK4P28324 431 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 CRISP3P54108 245 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 MERTKQ12866 999 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 SERPINA11Q86U17 422 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 OR10A6Q8NH74 314 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 TMEM234Q8WY98 164 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 CNOT9Q92600 299 aaKnown RBP21.13■□□□□ 0.97
TDP1-205ENST00000553527 ECSITQ9BQ95 431 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 PDZD2O15018 2839 aa21.13■□□□□ 0.97
TDP1-205ENST00000553527 A0A1W2PNR3 127 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 AGAP5A6NIR3 686 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 MSTNO14793 375 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 NTN1O95631 604 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 SLC7A1P30825 629 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 KCNJ5P48544 419 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 SLC7A2P52569 658 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 CTBP2P56545 445 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 PSME3P61289 254 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 FAM27E3Q08E93 113 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 SELENBP1Q13228 472 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 C8orf82Q6P1X6 216 aaPredicted RBP21.12■□□□□ 0.97
TDP1-205ENST00000553527 ZNF610Q8N9Z0 462 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 NFKBIDQ8NI38 313 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 WDR60Q8WVS4 1066 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 REXO5Q96IC2 774 aaKnown RBP21.12■□□□□ 0.97
TDP1-205ENST00000553527 SPATA9Q9BWV2 254 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 SRXN1Q9BYN0 137 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 TMEM38AQ9H6F2 299 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 TIGARQ9NQ88 270 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 SERINC1Q9NRX5 453 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 NDE1Q9NXR1 346 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 ITGB1BP2Q9UKP3 347 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 PROCRQ9UNN8 238 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 AP3M1Q9Y2T2 418 aa21.12■□□□□ 0.97
TDP1-205ENST00000553527 CSMD1Q96PZ7 3565 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 CCT8L1PA6NM43 557 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 UBOX5O94941 541 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 CDK6Q00534 326 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 SCARB2Q14108 478 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 MAPK11Q15759 364 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 SLC25A53Q5H9E4 307 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 RPS26P11Q5JNZ5 115 aaPredicted RBP21.11■□□□□ 0.97
TDP1-205ENST00000553527 AP1ARQ63HQ0 302 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 FAM214BQ7L5A3 538 aa21.11■□□□□ 0.97
TDP1-205ENST00000553527 NET1Q7Z628 596 aaPredicted RBP21.11■□□□□ 0.97
TDP1-205ENST00000553527 PEX5LQ8IYB4 626 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms