RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LRRC8CQ8TDW0 803 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 PIK3IP1Q96FE7 263 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 ZC3HAV1LQ96H79 300 aaKnown RBP11.54□□□□□ -0.56
ACTN1-207ENST00000553290 ITCHQ96J02 903 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 CCDC106Q9BWC9 280 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 HDHD5Q9BXW7 423 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 BCO1Q9HAY6 547 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 CALML5Q9NZT1 146 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
ACTN1-207ENST00000553290 IGHV3-15A0A0B4J1V0 119 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 FAM234BA2RU67 622 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 SULT2B1O00204 365 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 CYTIPO60759 359 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 BCAS1O75363 584 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 THBDP07204 575 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 IL7RP16871 459 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 CD53P19397 219 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 RPS4Y1P22090 263 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 HTR3AP46098 478 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 MRPL19P49406 292 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 CLK1P49759 484 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 DIO1P49895 249 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 PPP2R2AP63151 447 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 RASGEF1BQ0VAM2 473 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 TFAP2EQ6VUC0 442 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 DNAJC14Q6Y2X3 702 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 NUFIP2Q7Z417 695 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 HMGN2P46Q86SG4 172 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 TGIF2LYQ8IUE0 185 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 PEX5LQ8IYB4 626 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 STEAP2Q8NFT2 490 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 WDR60Q8WVS4 1066 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 PSD2Q9BQI7 771 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 TPT1P8Q9HAU6 139 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 CTPS2Q9NRF8 586 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 SLC6A13Q9NSD5 602 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 BEX4Q9NWD9 120 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 THUMPD1Q9NXG2 353 aaKnown RBP11.53□□□□□ -0.56
ACTN1-207ENST00000553290 P2RX2Q9UBL9 471 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
ACTN1-207ENST00000553290 CLDN24A6NM45 220 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF724A8MTY0 619 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 FAAHO00519 579 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 SMAD9O15198 467 aaKnown RBP11.52□□□□□ -0.57
ACTN1-207ENST00000553290 POLR3GO15318 223 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-207ENST00000553290 GCM2O75603 506 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-207ENST00000553290 PMS2P2O95744 297 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 TFPIP10646 304 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 CD99P14209 185 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 UQCRBP14927 111 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 FPR1P21462 350 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 CRATP43155 626 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 IDH2P48735 452 aaKnown RBP11.52□□□□□ -0.57
ACTN1-207ENST00000553290 MVDP53602 400 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 CRISP3P54108 245 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 DSTNP60981 165 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 STX1BP61266 288 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 CXorf67Q86X51 503 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-207ENST00000553290 ADGRG3Q86Y34 549 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF440Q8IYI8 595 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 GABRG1Q8N1C3 465 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 GOLGA6L1Q8N7Z2 621 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 OR9I1Q8NGQ6 314 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 DYDC1Q8WWB3 177 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 VPS33AQ96AX1 596 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 ZHX1-C8orf76Q96EF9 292 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 USB1Q9BQ65 265 aaKnown RBP11.52□□□□□ -0.57
ACTN1-207ENST00000553290 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 ACTR6Q9GZN1 396 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 TCF7L2Q9NQB0 619 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 HDGFL3Q9Y3E1 203 aa11.52□□□□□ -0.57
ACTN1-207ENST00000553290 TMEM247A6NEH6 219 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 KLF4O43474 513 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 DNPH1O43598 174 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 ADAM11O75078 769 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 FESP07332 822 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 ETFAP13804 333 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 KLK2P20151 261 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-207ENST00000553290 SLC1A3P43003 542 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 OR3A2P47893 321 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 MAP2K6P52564 334 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 NR1H2P55055 460 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 PLAURQ03405 335 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 P2RY6Q15077 328 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 PDK3Q15120 406 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 MAPK11Q15759 364 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 ACKR1Q16570 336 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 ZSWIM7Q19AV6 140 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 TTMPQ5BVD1 217 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 SFRP5Q5T4F7 317 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
ACTN1-207ENST00000553290 HDXQ7Z353 690 aa11.51□□□□□ -0.57
ACTN1-207ENST00000553290 MTDHQ86UE4 582 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms