RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 HSD17B8Q92506 261 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 OSTF1Q92882 214 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 VPS33AQ96AX1 596 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 S100PBPQ96BU1 408 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 ITCHQ96J02 903 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 SLC35G5Q96KT7 338 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
CKAP4-202ENST00000552828 SLC35A5Q9BS91 424 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 INPP5KQ9BT40 448 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 TMEM120AQ9BXJ8 343 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 UBQLN4Q9NRR5 601 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 CCDC167Q9P0B6 97 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 RNF115Q9Y4L5 304 aa10.54□□□□□ -0.72
CKAP4-202ENST00000552828 PCNX3Q9H6A9 2034 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ANP32DO95626 131 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 AGR2O95994 175 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 GSNP06396 782 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ELK4P28324 431 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ADH6P28332 368 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 IDUAP35475 653 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ZNF41P51814 821 aaPredicted RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 RPS26P62854 115 aaKnown RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 P2RY6Q15077 328 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ZNF239Q16600 458 aaKnown RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 AGKQ53H12 422 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 SFRP5Q5T4F7 317 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 SAXO2Q658L1 398 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 FIGNL1Q6PIW4 674 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 SEZ6L2Q6UXD5 910 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 TFAP2EQ6VUC0 442 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ZAR1Q86SH2 424 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 FUNDC1Q8IVP5 155 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 MIPOL1Q8TD10 442 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 CDS1Q92903 461 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 SPDL1Q96EA4 605 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 NEURL3Q96EH8 262 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 OTUB1Q96FW1 271 aaPredicted RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 TRMT61AQ96FX7 289 aaKnown RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 KLHL15Q96M94 604 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 ZNF317Q96PQ6 595 aaPredicted RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 OR7D2Q96RA2 312 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 KLHDC3Q9BQ90 382 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
CKAP4-202ENST00000552828 REG4Q9BYZ8 158 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 TMEM185BQ9H7F4 350 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 NGBQ9NPG2 151 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 MRGBPQ9NV56 204 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 KLHL14Q9P2G3 628 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 KLHL13Q9P2N7 655 aa10.53□□□□□ -0.72
CKAP4-202ENST00000552828 NR5A2O00482 541 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 TLX2O43763 284 aaPredicted RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 EFNA2O43921 213 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 KRT75O95678 551 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 CD3EP07766 207 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ATP6V1C1P21283 382 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 CDKN2CP42773 168 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ANXA11P50995 505 aaKnown RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 TXNL4AP83876 142 aaKnown RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 SF3A3Q12874 501 aaKnown RBP eCLIP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 TAB1Q15750 504 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 CD226Q15762 336 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF672Q499Z4 452 aaPredicted RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 C6orf10Q5SRN2 563 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ATAD3BQ5T9A4 648 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 CGB2Q6NT52 195 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 GATSQ8NAP1 163 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 OR5D16Q8NGK9 328 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 B4GALNT2Q8NHY0 566 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ABHD3Q8WU67 409 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 SMAP2Q8WU79 429 aaPredicted RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ROBO4Q8WZ75 1007 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 CPNE4Q96A23 557 aaPredicted RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 HOXD1Q9GZZ0 328 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 OR51I1Q9H343 314 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 ESRP2Q9H6T0 727 aaKnown RBP10.52□□□□□ -0.73
CKAP4-202ENST00000552828 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 TIGARQ9NQ88 270 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 EXD2Q9NVH0 621 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 FBXO34Q9NWN3 711 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 RTTNQ86VV8 2226 aa10.52□□□□□ -0.73
CKAP4-202ENST00000552828 HEATR5AQ86XA9 2040 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 PRR14LQ5THK1 2151 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SCDO00767 359 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 CD5LO43866 347 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 PRKD3O94806 890 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 AK1P00568 194 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 YES1P07947 543 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 ZCCHC18P0CG32 403 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 OR12D1P0DN82 309 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 HPGDP15428 266 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 SHC1P29353 583 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 KHKP50053 298 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 CASP9P55211 416 aa10.51□□□□□ -0.73
CKAP4-202ENST00000552828 VEZF1Q14119 521 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 380.4 ms