RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TIFABQ6ZNK6 161 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ESPNLQ6ZVH7 1005 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 STK32CQ86UX6 486 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 DDIASQ8IXT1 998 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 SAMD14Q8IZD0 417 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 CLECL1Q8IZS7 167 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF527Q8NB42 609 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 OR52E4Q8NGH9 312 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PIWIL2Q8TC59 973 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 GPR119Q8TDV5 335 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ZG16BQ96DA0 208 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ERP27Q96DN0 273 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 REXO5Q96IC2 774 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 HS6ST2Q96MM7 605 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PSD2Q9BQI7 771 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 TRAF4Q9BUZ4 470 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 THUMPD3Q9BV44 507 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 GATA5Q9BWX5 397 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 CACNG6Q9BXT2 260 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 OR11A1Q9GZK7 315 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 REEP4Q9H6H4 257 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 CHODLQ9H9P2 273 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 UBQLN4Q9NRR5 601 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ZCCHC3Q9NUD5 404 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 C1orf109Q9NX04 203 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 TAS2R7Q9NYW3 318 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 TRAF6Q9Y4K3 522 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 A8MV72 311 aaPredicted RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 KLF11O14901 512 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 AZIN1O14977 448 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 LSM1O15116 133 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CD5LO43866 347 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SPAG7O75391 227 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 PRKD3O94806 890 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SLU7O95391 586 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 FESP07332 822 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 YES1P07947 543 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 UBTFL6P0CB48 400 aaPredicted RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 TFPIP10646 304 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CPA3P15088 417 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 PAX1P15863 534 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CREB1P16220 341 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ZNF17P17021 662 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CDH2P19022 906 aaPredicted RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 IDUAP35475 653 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SOAT1P35610 550 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CKAP4Q07065 602 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 RASGEF1BQ0VAM2 473 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 PCLAFQ15004 111 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 P2RY6Q15077 328 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 PPA1Q15181 289 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CARTPTQ16568 116 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 PGS1Q32NB8 556 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SPDYE7PQ495Y7 208 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 TIGD2Q4W5G0 525 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ATP6AP1LQ52LC2 224 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 KLHL26Q53HC5 615 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 DCST2Q5T1A1 773 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 DNM1P46Q6ZS02 220 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 TRABD2AQ86V40 505 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 HIPK1Q86Z02 1210 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SLC22A9Q8IVM8 553 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 UBE2J2Q8N2K1 259 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ANKS4BQ8N8V4 417 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CDRT4Q8N9R6 151 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 STEAP2Q8NFT2 490 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ZFP90Q8TF47 636 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 HOXB13Q92826 284 aaPredicted RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 RAB8BQ92930 207 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 CAVIN3Q969G5 261 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ZBTB8AQ96BR9 441 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 TRMT61AQ96FX7 289 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 C1orf159Q96HA4 380 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ARL5BQ96KC2 179 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 MS4A4EQ96PG1 132 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SOX7Q9BT81 388 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 BTBD2Q9BX70 525 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 TXLNGYQ9BZA5 131 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 ESRP2Q9H6T0 727 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 RRAGDQ9NQL2 400 aaPredicted RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SIRT5Q9NXA8 310 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 SLC17A7Q9P2U7 560 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 MRTO4Q9UKD2 239 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 MKLN1Q9UL63 735 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 GRID1Q9ULK0 1009 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 DNAJC15Q9Y5T4 150 aa6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 YLPM1P49750 1951 aaKnown RBP6.02□□□□□ -1.45
PRPF40B-214ENST00000551320 A0A087WZY1 265 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 CCT8L1PA6NM43 557 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 AP3D1O14617 1153 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 SCAMP2O15127 329 aaKnown RBP6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 CFLARO15519 480 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 LYPLA1O75608 230 aaPredicted RBP6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 UROSP10746 265 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 PPP3CBP16298 524 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 ATP6V1C1P21283 382 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 SLC7A1P30825 629 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 ALDH3A1P30838 453 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 OR3A2P47893 321 aa6.01□□□□□ -1.45
PRPF40B-214ENST00000551320 CCT3P49368 545 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms