RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TRNT1Q96Q11 434 aaKnown RBP11.58□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF300Q96RE9 604 aaPredicted RBP11.58□□□□□ -0.56
NPAS3-209ENST00000551008 SLC39A3Q9BRY0 314 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 BCO1Q9HAY6 547 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 SLC52A3Q9NQ40 469 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 EXOSC3Q9NQT5 275 aaKnown RBP11.58□□□□□ -0.56
NPAS3-209ENST00000551008 CTPS2Q9NRF8 586 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 SLC35A3Q9Y2D2 325 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 CHST2Q9Y4C5 530 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 USH1CQ9Y6N9 552 aa11.58□□□□□ -0.56
NPAS3-209ENST00000551008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.57□□□□□ -0.56
NPAS3-209ENST00000551008 CYTIPO60759 359 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 RAMP1O60894 148 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 SLC22A3O75751 556 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 PLAUP00749 431 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 ZCCHC18P0CG32 403 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 ETFAP13804 333 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 PGCP20142 388 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 NTF4P34130 210 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 MRPL19P49406 292 aaKnown RBP11.57□□□□□ -0.56
NPAS3-209ENST00000551008 FOXD4Q12950 439 aaPredicted RBP11.57□□□□□ -0.56
NPAS3-209ENST00000551008 RNPS1Q15287 305 aaKnown RBP11.57□□□□□ -0.56
NPAS3-209ENST00000551008 GSTA3Q16772 222 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 SYT14P1Q58G82 188 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 PDSS1Q5T2R2 415 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 FBXW10Q5XX13 1052 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 ABLIM2Q6H8Q1 611 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 ADGRG3Q86Y34 549 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 MSRB3Q8IXL7 192 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 C10orf111Q8N326 155 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 DNAJA3Q96EY1 480 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 ATP6V1G3Q96LB4 118 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 C7orf26Q96N11 449 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 OR5B2Q96R09 309 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 EBF4Q9BQW3 602 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 OR11A1Q9GZK7 315 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 PAIP1Q9H074 479 aaKnown RBP11.57□□□□□ -0.56
NPAS3-209ENST00000551008 GP6Q9HCN6 339 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 ZANQ9Y493 2812 aa11.57□□□□□ -0.56
NPAS3-209ENST00000551008 GJE1A6NN92 205 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 RFXANKO14593 260 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 CASKO14936 926 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 UBDO15205 165 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 DIAPH2O60879 1101 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 IL6P05231 212 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 FESP07332 822 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 SLC7A1P30825 629 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 HOXC12P31275 282 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 RYKP34925 604 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 DIO1P49895 249 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
NPAS3-209ENST00000551008 RPS26P11Q5JNZ5 115 aaPredicted RBP11.56□□□□□ -0.56
NPAS3-209ENST00000551008 MRPL2Q5T653 305 aaKnown RBP11.56□□□□□ -0.56
NPAS3-209ENST00000551008 TMPPEQ6ZT21 453 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 MSANTD1Q6ZTZ1 278 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 BEND4Q6ZU67 534 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.56□□□□□ -0.56
NPAS3-209ENST00000551008 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
NPAS3-209ENST00000551008 VRK2Q86Y07 508 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 WFDC11Q8NEX6 87 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 GTF2H4Q92759 462 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 ZBTB18Q99592 522 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 TMEM204Q9BSN7 226 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 ACTR6Q9GZN1 396 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.56□□□□□ -0.56
NPAS3-209ENST00000551008 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF226Q9NYT6 803 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 PRSS50Q9UI38 385 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 LIPT1Q9Y234 373 aa11.56□□□□□ -0.56
NPAS3-209ENST00000551008 NSD1Q96L73 2696 aaPredicted RBP11.55□□□□□ -0.56
NPAS3-209ENST00000551008 TLN2Q9Y4G6 2542 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 NAV3Q8IVL0 2385 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 ZC3H12DA2A288 527 aaKnown RBP11.55□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF716A6NP11 495 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 PRKD3O94806 890 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 YES1P07947 543 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 NUDT7P0C024 238 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 TFPTP0C1Z6 253 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 OR3A2P47893 321 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 IDH2P48735 452 aaKnown RBP11.55□□□□□ -0.56
NPAS3-209ENST00000551008 IDH3AP50213 366 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 LRRC74AQ0VAA2 488 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 EPS8Q12929 822 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 KEAP1Q14145 624 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 SLC2A7Q6PXP3 512 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF836Q6ZNA1 936 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 GRINAQ7Z429 371 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 CMIPQ8IY22 773 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 SLC43A2Q8N370 569 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 TRIML2Q8N7C3 387 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 SLC38A5Q8WUX1 472 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 WDR60Q8WVS4 1066 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 S100PBPQ96BU1 408 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
NPAS3-209ENST00000551008 OR10A4Q9H209 315 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 TPT1P8Q9HAU6 139 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 TIGARQ9NQ88 270 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 SLC25A37Q9NYZ2 338 aa11.55□□□□□ -0.56
NPAS3-209ENST00000551008 CHRNA9Q9UGM1 479 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms