RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 NDUFAF1Q9Y375 327 aa11.93□□□□□ -0.5
CEP290-205ENST00000550962 INTS1Q8N201 2190 aaKnown RBP11.93□□□□□ -0.5
CEP290-205ENST00000550962 DSPPQ9NZW4 1301 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 PRAMEF27A3QJZ7 478 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 SH3D21A4FU49 640 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 A6NNC1 897 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 ATP8B1O43520 1251 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 DNPH1O43598 174 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 VIMP08670 466 aaKnown RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 TFPTP0C1Z6 253 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 IL11P20809 199 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 IDH2P48735 452 aaKnown RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 MVDP53602 400 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 DAZAP2Q15038 168 aaPredicted RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 GUSBP1Q15486 140 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 GTDC1Q4AE62 458 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 GCNT6Q5T4J0 391 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 FUNDC1Q8IVP5 155 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 THOC1Q96FV9 657 aaKnown RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 NPAS1Q99742 590 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 OPN3Q9H1Y3 402 aaPredicted RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 CLEC4MQ9H2X3 399 aaPredicted RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 KLHL13Q9P2N7 655 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 ZNF443Q9Y2A4 671 aaPredicted RBP11.92□□□□□ -0.5
CEP290-205ENST00000550962 HDGFL3Q9Y3E1 203 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 MED12Q93074 2177 aa11.92□□□□□ -0.5
CEP290-205ENST00000550962 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 CDHR4A6H8M9 788 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 SULT2B1O00204 365 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 CTAG2O75638 210 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 BMP2P12643 396 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 ETS2P15036 469 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 PPP3CBP16298 524 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 AGTR1P30556 359 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 SLC1A3P43003 542 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 MAPRE2Q15555 327 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 ZNF311Q5JNZ3 666 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 TMPPEQ6ZT21 453 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 BHLHE22Q8NFJ8 381 aaPredicted RBP11.91□□□□□ -0.5
CEP290-205ENST00000550962 CNOT9Q92600 299 aaKnown RBP11.91□□□□□ -0.5
CEP290-205ENST00000550962 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 ZG16BQ96DA0 208 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 ZNF607Q96SK3 696 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 KLHDC3Q9BQ90 382 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 GPATCH1Q9BRR8 931 aaKnown RBP11.91□□□□□ -0.5
CEP290-205ENST00000550962 MED18Q9BUE0 208 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 SPATA9Q9BWV2 254 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 COQ10BQ9H8M1 238 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 BCL2L10Q9HD36 194 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 CTPS2Q9NRF8 586 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 RASSF1Q9NS23 344 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 SLC13A4Q9UKG4 626 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 CLEC4AQ9UMR7 237 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 GMEB1Q9Y692 573 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 CRYBG3Q68DQ2 2970 aa11.91□□□□□ -0.5
CEP290-205ENST00000550962 A0A1W2PNR3 127 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 PRORSD1PA6NEY8 169 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 CLDN24A6NM45 220 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ZNF208O43345 1280 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 PMS2P2O95744 297 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 CGAP01215 116 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 YES1P07947 543 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 SLC6A2P23975 617 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 CXCR1P25024 350 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 SHC1P29353 583 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 UGT2B10P36537 528 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 DIO1P49895 249 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ARFIP2P53365 341 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 EPS8Q12929 822 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 SNTB1Q13884 538 aaKnown RBP11.9□□□□□ -0.5
CEP290-205ENST00000550962 EXOC3L2Q2M3D2 409 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 WBP2NLQ6ICG8 309 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 REEP3Q6NUK4 255 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 HMGN2P46Q86SG4 172 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 DHDDSQ86SQ9 333 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 LINC01560Q8TB33 94 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 PIGXQ8TBF5 258 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ABHD3Q8WU67 409 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ROBO4Q8WZ75 1007 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
CEP290-205ENST00000550962 TMEM120AQ9BXJ8 343 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 SRXN1Q9BYN0 137 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 EVA1AQ9H8M9 152 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 CELSR2Q9HCU4 2923 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ZNF446Q9NWS9 450 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 KLHL28Q9NXS3 571 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 ANGPT4Q9Y264 503 aa11.9□□□□□ -0.5
CEP290-205ENST00000550962 CENPEQ02224 2701 aa11.89□□□□□ -0.51
CEP290-205ENST00000550962 TMED7-TICAM2A0A0A6YYA0 188 aa11.89□□□□□ -0.51
CEP290-205ENST00000550962 GPR171O14626 319 aa11.89□□□□□ -0.51
CEP290-205ENST00000550962 EFNA2O43921 213 aa11.89□□□□□ -0.51
CEP290-205ENST00000550962 EIF1BO60739 113 aaKnown RBP11.89□□□□□ -0.51
CEP290-205ENST00000550962 SERPINB7O75635 380 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms