RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 OSTNP61366 133 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 GPM6BQ13491 265 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 CAMK4Q16566 473 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 EIPR1Q53HC9 387 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 DCST2Q5T1A1 773 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 SULT1C3Q6IMI6 304 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 GRAMD2AQ8IUY3 354 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 OR10T2Q8NGX3 314 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 RANBP9Q96S59 729 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 OPN3Q9H1Y3 402 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-205ENST00000550592 RIBC2Q9H4K1 309 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 CALHM2Q9HA72 323 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 EXOSC3Q9NQT5 275 aaKnown RBP3.75□□□□□ -1.81
LIMA1-205ENST00000550592 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.75□□□□□ -1.81
LIMA1-205ENST00000550592 CUTCQ9NTM9 273 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 ELOVL2Q9NXB9 296 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 RDH8Q9NYR8 311 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 GMPPBQ9Y5P6 360 aa3.75□□□□□ -1.81
LIMA1-205ENST00000550592 SPTAN1Q13813 2472 aaKnown RBP3.75□□□□□ -1.81
LIMA1-205ENST00000550592 COL4A4P53420 1690 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-205ENST00000550592 WDR87Q6ZQQ6 2873 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 CCT8L1PA6NM43 557 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 FAM220BPB1ANY3 271 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 G3V3Y1 287 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 SLC17A2O00624 439 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 BCL2L11O43521 198 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 CABYRO75952 493 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 MBD3O95983 291 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 ALPIP09923 528 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 H2AFZP0C0S5 128 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 LAMP1P11279 417 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 BCKDHAP12694 445 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 KRT13P13646 458 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 CDH5P33151 784 aaPredicted RBP3.74□□□□□ -1.81
LIMA1-205ENST00000550592 ALDH3B2P48448 385 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 ACADVLP49748 655 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 LMO4P61968 165 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 PAX2Q02962 417 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 OVGP1Q12889 678 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 IL18R1Q13478 541 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 CYP51A1Q16850 503 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 SLX4IPQ5VYV7 408 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 RNLSQ5VYX0 342 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 NCR3LG1Q68D85 454 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 GCNT7Q6ZNI0 430 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 CYS1Q717R9 158 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 SERINC5Q86VE9 423 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 PARGQ86W56 976 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 PKNOX2Q96KN3 472 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 SLC30A2Q9BRI3 323 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 PYGO2Q9BRQ0 406 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 TMEM121Q9BTD3 319 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 TPPP3Q9BW30 176 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 NFKBIZQ9BYH8 718 aa3.74□□□□□ -1.81
LIMA1-205ENST00000550592 CGNQ9P2M7 1197 aaKnown RBP3.74□□□□□ -1.81
LIMA1-205ENST00000550592 SYNRGQ9UMZ2 1314 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 SIP14410 1827 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 BPTFQ12830 3046 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 EFCAB7A8K855 629 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 CLDN5O00501 218 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 DUX1O43812 170 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 RHBDL1O75783 438 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 CNMDO75829 334 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ANP32DO95626 131 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 OPN1LWP04000 364 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ASNSP08243 561 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ANXA3P12429 323 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 IDSP22304 550 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 RPL4P36578 427 aaKnown RBP3.73□□□□□ -1.81
LIMA1-205ENST00000550592 DLSTP36957 453 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 IST1P53990 364 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 PLOD1Q02809 727 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ELP6Q0PNE2 266 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 RUNX3Q13761 415 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 Q1RN00 199 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 SLC22A6Q4U2R8 563 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 MEDAGQ5VYS4 303 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 HSD11B1LQ7Z5J1 315 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ANKRD37Q7Z713 158 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 CDC20BQ86Y33 519 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 HSCBQ8IWL3 235 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 VN1R17PQ8TDU5 208 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 DHTKD1Q96HY7 919 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ANP32EQ9BTT0 268 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 DHX33Q9H6R0 707 aaKnown RBP3.73□□□□□ -1.81
LIMA1-205ENST00000550592 UTP6Q9NYH9 597 aaKnown RBP3.73□□□□□ -1.81
LIMA1-205ENST00000550592 EHFQ9NZC4 300 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 CYTH4Q9UIA0 394 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 IGF2RP11717 2491 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ASPMQ8IZT6 3477 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 ROBO3Q96MS0 1386 aa3.73□□□□□ -1.81
LIMA1-205ENST00000550592 SF3B1O75533 1304 aaKnown RBP eCLIP3.72□□□□□ -1.818e-6■■■■■ 107
LIMA1-205ENST00000550592 DMDP11532 3685 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 CREBBPQ92793 2442 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 FANCMQ8IYD8 2048 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 LOC285556D6RIA3 1793 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 CEP295Q9C0D2 2601 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 HECTD1Q9ULT8 2610 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 ESYT2A0FGR8 921 aa3.72□□□□□ -1.81
LIMA1-205ENST00000550592 ZSCAN5BA6NJL1 495 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms