RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PGAM2P15259 253 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 JUNBP17275 347 aaPredicted RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 OR3A3P47888 321 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 OR3A2P47893 321 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 ACTA2P62736 377 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 ACTG2P63267 376 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 DLX2Q07687 328 aaPredicted RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 GDPGP1Q6ZNW5 385 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 RASSF6Q6ZTQ3 369 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 MBOAT2Q6ZWT7 520 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 ADGRF3Q8IZF5 1079 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 KDM8Q8N371 416 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 DUSP19Q8WTR2 217 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 UBQLN4Q9NRR5 601 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 CCDC88CQ9P219 2028 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 POU2F3Q9UKI9 436 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 FXYD6-FXYD2A0A087WZ82 144 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 MAKP20794 623 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 PRPH2P23942 346 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 APEX1P27695 318 aaKnown RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 DBPQ10586 325 aaPredicted RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 TMEM164Q5U3C3 297 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 SLITRK4Q8IW52 837 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 RCBTB1Q8NDN9 531 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 ZNF775Q96BV0 537 aaPredicted RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 C19orf43Q9BQ61 176 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 FXYD6Q9H0Q3 95 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 ATG5Q9H1Y0 275 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 MOV10Q9HCE1 1003 aaKnown RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 TXNL4BQ9NX01 149 aaKnown RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 ZNF226Q9NYT6 803 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 GRIP1Q9Y3R0 1128 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 A0A1B0GVI7 797 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 GABRPO00591 440 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 NARSO43776 548 aaKnown RBP13.92□□□□□ -0.18
CUX1-214ENST00000550008 SLC16A7O60669 478 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 PAPLNO95428 1278 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 HSF2Q03933 536 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 TLE3Q04726 772 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 BCL2L15Q5TBC7 163 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 ZNF440Q8IYI8 595 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 TCTN2Q96GX1 697 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
CUX1-214ENST00000550008 MAPK3P27361 379 aaPredicted RBP13.91□□□□□ -0.18
CUX1-214ENST00000550008 SHC1P29353 583 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 OR7A5Q15622 319 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 FOXRED2Q8IWF2 684 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 LSM14AQ8ND56 463 aaKnown RBP13.91□□□□□ -0.18
CUX1-214ENST00000550008 CASTOR1Q8WTX7 329 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 TMEM246Q9BRR3 403 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 TTYH1Q9H313 450 aaPredicted RBP13.91□□□□□ -0.18
CUX1-214ENST00000550008 TMEM72A0PK05 275 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 MEIS3P1A6NDR6 274 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 GABRG2P18507 467 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 RPS19P39019 145 aaKnown RBP13.91□□□□□ -0.18
CUX1-214ENST00000550008 KIAA1024LP59773 190 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 VWA2Q5GFL6 755 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 PRAMEF8Q5VWM4 474 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 PRAMEF7Q5VXH5 474 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 CTRCQ99895 268 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 FBXL3Q9UKT7 428 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 DHDHQ9UQ10 334 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 PCDHGA3Q9Y5H0 932 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 A0A1W2PQ72 361 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 G3V3Y1 287 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 SLC19A2O60779 497 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 CTSVO60911 334 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 CPNE6O95741 557 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 ATF4P18848 351 aaPredicted RBP13.91□□□□□ -0.18
CUX1-214ENST00000550008 PRKAR1BP31321 381 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 ETV5P41161 510 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 ETV1P50549 477 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 HCCSP53701 268 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 PRAMEF17Q5VTA0 474 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 EEF1A1P5Q5VTE0 462 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 PAQR7Q86WK9 346 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 SETD6Q8TBK2 473 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 NXPE2Q96DL1 559 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 EPHA6Q9UF33 1036 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 TMEM14AQ9Y6G1 99 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 SCN4AP35499 1836 aa13.91□□□□□ -0.18
CUX1-214ENST00000550008 SYT5O00445 386 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 PRSS23O95084 383 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 STOMP27105 288 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 TACR3P29371 465 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 PPP1CAP62136 330 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 FOXK2Q01167 660 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 POU4F2Q12837 409 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 LRRC37A5PQ49AS3 106 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 EID2Q8N6I1 236 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 BBS1Q8NFJ9 593 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 FKBP10Q96AY3 582 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 NT5DC2Q9H857 520 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 HINT3Q9NQE9 182 aaKnown RBP13.9□□□□□ -0.18
CUX1-214ENST00000550008 SLC17A4Q9Y2C5 497 aa13.9□□□□□ -0.18
CUX1-214ENST00000550008 RLFQ13129 1914 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms