RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SMAD9O15198 467 aaKnown RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 ERLIN1O75477 346 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 PLAUP00749 431 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 ADAP00813 363 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 TFPIP10646 304 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 FOSL1P15407 271 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 IL32P24001 234 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 DIO1P49895 249 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 KCNJ10P78508 379 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 SYT14P1Q58G82 188 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 Q5PR19 223 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 SHEQ5VZ18 495 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 DNAJC14Q6Y2X3 702 aaPredicted RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 ZNF704Q6ZNC4 412 aaPredicted RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 ZNF775Q96BV0 537 aaPredicted RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 DNAJA3Q96EY1 480 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 ZNF300Q96RE9 604 aaPredicted RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 TACO1Q9BSH4 297 aaKnown RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 OR10A4Q9H209 315 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 MANSC1Q9H8J5 431 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 BCO1Q9HAY6 547 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 TMBIM4Q9HC24 238 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 CTPS2Q9NRF8 586 aa14.51□□□□□ -0.09
VPS29-207ENST00000549970 ING1Q9UK53 422 aaPredicted RBP14.51□□□□□ -0.09
VPS29-207ENST00000549970 SLCO1B7G3V0H7 640 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 SULT2B1O00204 365 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 ARHGEF9O43307 516 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 CYTIPO60759 359 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 FESP07332 822 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 CHRM4P08173 479 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 APOBEC1P41238 236 aaKnown RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 ANXA11P50995 505 aaKnown RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 SLC18A1P54219 525 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 NR1H2P55055 460 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 PLAURQ03405 335 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 LRRC74AQ0VAA2 488 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 SLC9B1Q4ZJI4 515 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 COX20Q5RI15 118 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 SFRP5Q5T4F7 317 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 TMPPEQ6ZT21 453 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 LSRQ86X29 649 aaPredicted RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 LRRC75A-AS1Q8N1F1 130 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 ARFGAP2Q8N6H7 521 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 GLB1L3Q8NCI6 653 aaPredicted RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 RAB3IL1Q8TBN0 382 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 SLC25A43Q8WUT9 341 aaPredicted RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 KISS1RQ969F8 398 aaPredicted RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 TLCD1Q96CP7 247 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 PERPQ96FX8 193 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 TRNT1Q96Q11 434 aaKnown RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 CCDC106Q9BWC9 280 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 HDHD5Q9BXW7 423 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 SLC38A1Q9H2H9 487 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 CHRNA9Q9UGM1 479 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 PRSS50Q9UI38 385 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 LIPT1Q9Y234 373 aa14.5□□□□□ -0.09
VPS29-207ENST00000549970 SPIN1Q9Y657 262 aaPredicted RBP14.5□□□□□ -0.09
VPS29-207ENST00000549970 ZNF814B7Z6K7 855 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 RFXANKO14593 260 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 ADAM11O75078 769 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 NR2F1P10589 423 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 IDO1P14902 403 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 CCNA2P20248 432 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 EDNRAP25101 427 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 CSNK2A1P68400 391 aaPredicted RBP14.49□□□□□ -0.09
VPS29-207ENST00000549970 PDCD4Q53EL6 469 aaKnown RBP14.49□□□□□ -0.09
VPS29-207ENST00000549970 BEND6Q5SZJ8 279 aaPredicted RBP14.49□□□□□ -0.09
VPS29-207ENST00000549970 AP1ARQ63HQ0 302 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 GRINAQ7Z429 371 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 MAVSQ7Z434 540 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 CNOT9Q92600 299 aaKnown RBP14.49□□□□□ -0.09
VPS29-207ENST00000549970 MAELQ96JY0 434 aaKnown RBP14.49□□□□□ -0.09
VPS29-207ENST00000549970 SMR3AQ99954 134 aa14.49□□□□□ -0.09
VPS29-207ENST00000549970 EXOSC3Q9NQT5 275 aaKnown RBP14.49□□□□□ -0.09
VPS29-207ENST00000549970 AGAP5A6NIR3 686 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 AP3D1O14617 1153 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 SLC22A3O75751 556 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 LYZL6O75951 148 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 KRT75O95678 551 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 IL6P05231 212 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 OR3A2P47893 321 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 IDH2P48735 452 aaKnown RBP14.48□□□□□ -0.09
VPS29-207ENST00000549970 TXNL4AP83876 142 aaKnown RBP14.48□□□□□ -0.09
VPS29-207ENST00000549970 ITGADQ13349 1161 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 CAPRIN1Q14444 709 aaKnown RBP14.48□□□□□ -0.09
VPS29-207ENST00000549970 P2RY6Q15077 328 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 TAB1Q15750 504 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 LRRC74BQ6ZQY2 392 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 WDR60Q8WVS4 1066 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 ZNF75CPQ92670 426 aaPredicted RBP14.48□□□□□ -0.09
VPS29-207ENST00000549970 ARL5BQ96KC2 179 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 C18orf12Q96KH6 178 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 OR52B2Q96RD2 323 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 OR11A1Q9GZK7 315 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 SLC6A13Q9NSD5 602 aa14.48□□□□□ -0.09
VPS29-207ENST00000549970 ZNF724A8MTY0 619 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 CLOCKO15516 846 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 ANP32DO95626 131 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 INHBBP09529 407 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms