RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 NCMAPQ5T1S8 102 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 ADAM5Q6NVV9 412 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 YTHDF3Q7Z739 585 aaKnown RBP11.91□□□□□ -0.5
GCN1-206ENST00000549815 ZNF619Q8N2I2 560 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 RAB3IL1Q8TBN0 382 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 TMEM234Q8WY98 164 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 PERPQ96FX8 193 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 Q96MF0 132 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 SLC35A5Q9BS91 424 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 CENPHQ9H3R5 247 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 EXOSC3Q9NQT5 275 aaKnown RBP11.91□□□□□ -0.5
GCN1-206ENST00000549815 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
GCN1-206ENST00000549815 MARCOQ9UEW3 520 aaPredicted RBP11.91□□□□□ -0.5
GCN1-206ENST00000549815 SLC35A3Q9Y2D2 325 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 GPR45Q9Y5Y3 372 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 USF3Q68DE3 2245 aa11.91□□□□□ -0.5
GCN1-206ENST00000549815 FN1P02751 2386 aaKnown RBP11.91□□□□□ -0.5
GCN1-206ENST00000549815 C9JVG2 144 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 HS3ST1O14792 307 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 TMCC2O75069 709 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 FESP07332 822 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 S100A3P33764 101 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 CDKN2CP42773 168 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 DIO1P49895 249 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 NME5P56597 212 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 MERTKQ12866 999 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 ITGADQ13349 1161 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 P2RY6Q15077 328 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 SYT14P1Q58G82 188 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 ATAD3BQ5T9A4 648 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 Q6ZT83 130 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 Q71RC1 249 aaPredicted RBP11.9□□□□□ -0.5
GCN1-206ENST00000549815 HMGN2P46Q86SG4 172 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 ATG4DQ86TL0 474 aaPredicted RBP11.9□□□□□ -0.5
GCN1-206ENST00000549815 ANKFN1Q8N957 763 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 HSD17B8Q92506 261 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 KISS1RQ969F8 398 aaPredicted RBP11.9□□□□□ -0.5
GCN1-206ENST00000549815 ARL8AQ96BM9 186 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 INPP5KQ9BT40 448 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 SLC38A1Q9H2H9 487 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 CTPS2Q9NRF8 586 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 SERINC1Q9NRX5 453 aa11.9□□□□□ -0.5
GCN1-206ENST00000549815 CADP27708 2225 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 IGKV3D-15A0A087WSY6 115 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 TRIM64A6NGJ6 449 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 TRIM64BA6NI03 449 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 H7C1Q1 480 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 LY6G6DO95868 133 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 PGRP06401 933 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 HEXAP06865 529 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 CHRM4P08173 479 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 IL32P24001 234 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 EPHA3P29320 983 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 CHI3L1P36222 383 aaPredicted RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 KCNJ10P78508 379 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 CAPRIN1Q14444 709 aaKnown RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 PDK3Q15120 406 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 MAPK11Q15759 364 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 SYPL1Q16563 259 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 GRINAQ7Z429 371 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 SPATA19Q7Z5L4 167 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 CROCCP2Q86T23 111 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 LSRQ86X29 649 aaPredicted RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 RNF130Q86XS8 419 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 ADGRG3Q86Y34 549 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 ZNF563Q8TA94 476 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 SLC25A43Q8WUT9 341 aaPredicted RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 TMEM171Q8WVE6 324 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 AKAP1Q92667 903 aaKnown RBP eCLIP11.89□□□□□ -0.51
GCN1-206ENST00000549815 ZNF775Q96BV0 537 aaPredicted RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 ARL5BQ96KC2 179 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 PAIP2Q9BPZ3 127 aaKnown RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 USB1Q9BQ65 265 aaKnown RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 POTEKPQ9BYX7 375 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
GCN1-206ENST00000549815 THAP1Q9NVV9 213 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 CHRNA9Q9UGM1 479 aa11.89□□□□□ -0.51
GCN1-206ENST00000549815 TMEM120BA0PK00 339 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 DPRXA6NFQ7 191 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 CCDC154A6NI56 674 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 AGAP5A6NIR3 686 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 SULT2B1O00204 365 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 HDAC3O15379 428 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 PGM3O95394 542 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 PMS2P2O95744 297 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 DANCRP0C864 163 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 COX5AP20674 150 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 RPS4Y1P22090 263 aaKnown RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 IGHV1-2P23083 117 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 NTF4P34130 210 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 RYKP34925 604 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 MVDP53602 400 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms