RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RAB11FIP5Q9BXF6 653 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF350Q9GZX5 532 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 PHPT1Q9NRX4 125 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 LYARQ9NX58 379 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 KCMF1Q9P0J7 381 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 SLC35A3Q9Y2D2 325 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 SPEF1Q9Y4P9 236 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 GNB5O14775 395 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 SHOXO15266 292 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 P2RX6O15547 441 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 DNASE1P24855 282 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 EXOSC2Q13868 293 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 EXOSC7Q15024 291 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 CDK20Q8IZL9 346 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF614Q8N883 585 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF527Q8NB42 609 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 SPPL3Q8TCT6 385 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 HAVCR2Q8TDQ0 301 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 ADAMTS14Q8WXS8 1223 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 SORCS2Q96PQ0 1159 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 LRRN3Q9H3W5 708 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 DLL4Q9NR61 685 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 INPP5EQ9NRR6 644 aa13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
RAPGEF3-218ENST00000548919 GMDSO60547 372 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 STX11O75558 287 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 TFP02787 698 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 NID1P14543 1247 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 MAGEB1P43366 347 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 SNTA1Q13424 505 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 TRAM1Q15629 374 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 CST6Q15828 149 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 LGALS14Q8TCE9 139 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 SPRTNQ9H040 489 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 MED31Q9Y3C7 131 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 TIMP1P01033 207 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 THBS1P07996 1170 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 NGFRP08138 427 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 SULT1A3P0DMM9 295 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 SULT1A4P0DMN0 295 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF3P17036 446 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 KLF9Q13886 244 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 AMZ1Q400G9 498 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 TMPRSS11FQ6ZWK6 438 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 PRSS41Q7RTY9 318 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 RNF113BQ8IZP6 322 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 COX18Q8N8Q8 333 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR2T35Q8NGX2 323 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR4K13Q8NH42 304 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 RPLP0P6Q8NHW5 317 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 ZNF671Q8TAW3 534 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 LRRC20Q8TCA0 184 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 HMGB4Q8WW32 186 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 LCN9Q8WX39 176 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 GAL3ST3Q96A11 431 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 PELI1Q96FA3 418 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 TIMM29Q9BSF4 260 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 TMEM168Q9H0V1 697 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 METTL17Q9H7H0 456 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 NTMQ9P121 344 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 SPTBP11277 2137 aa13.05□□□□□ -0.32
RAPGEF3-218ENST00000548919 MEIKINA0A087WXM9 373 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 IMPA2O14732 288 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 FLRT2O43155 660 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 ADAM11O75078 769 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 AGR2O95994 175 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 DBIP07108 87 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 CD53P19397 219 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 GDNFP39905 211 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 PSMB10P40306 273 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 TSFMP43897 325 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 GDI2P50395 445 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 TAS2R43P59537 309 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 RPL6Q02878 288 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 SUZ12Q15022 739 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 PSRC1Q6PGN9 363 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 PAQR7Q86WK9 346 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 SERPINA12Q8IW75 414 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR52E2Q8NGJ4 325 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 SARGQ9BW04 601 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 CHIAQ9BZP6 476 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 C20orf85Q9H1P6 137 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 TBC1D3EA0A087X179 549 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 PSMD9O00233 223 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 PTP4A3O75365 173 aa13.04□□□□□ -0.32
RAPGEF3-218ENST00000548919 HRGP04196 525 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms