RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PRICKLE2Q7Z3G6 844 aa19.03■□□□□ 0.64
CACNB3-210ENST00000548874 ATG4DQ86TL0 474 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-210ENST00000548874 ADGRG3Q86Y34 549 aa19.03■□□□□ 0.64
CACNB3-210ENST00000548874 DNAJA4Q8WW22 397 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-210ENST00000548874 SARAFQ96BY9 339 aa19.03■□□□□ 0.64
CACNB3-210ENST00000548874 TIMP4Q99727 224 aa19.03■□□□□ 0.64
CACNB3-210ENST00000548874 POLR2J2Q9GZM3 115 aaKnown RBP19.03■□□□□ 0.64
CACNB3-210ENST00000548874 POLR2J3Q9H1A7 115 aaKnown RBP19.03■□□□□ 0.64
CACNB3-210ENST00000548874 C12orf10Q9HB07 376 aa19.03■□□□□ 0.64
CACNB3-210ENST00000548874 AP4B1Q9Y6B7 739 aa19.03■□□□□ 0.64
CACNB3-210ENST00000548874 MED12Q93074 2177 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 CPSF4LA6NMK7 179 aaKnown RBP19.02■□□□□ 0.64
CACNB3-210ENST00000548874 ZNHIT1O43257 154 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 ZNF708P17019 499 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 STARP49675 285 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 CLDN18P56856 261 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 VLDLRP98155 873 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 SELENBP1Q13228 472 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 BCL2A1Q16548 175 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 SWT1Q5T5J6 900 aaKnown RBP19.02■□□□□ 0.64
CACNB3-210ENST00000548874 ADAMTS16Q8TE57 1224 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 MAGIXQ9H6Y5 334 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 TNFRSF10DQ9UBN6 386 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 RPS6KB2Q9UBS0 482 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 CHRNA9Q9UGM1 479 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 ZNF835Q9Y2P0 537 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 ENPP4Q9Y6X5 453 aa19.02■□□□□ 0.64
CACNB3-210ENST00000548874 SVILO95425 2214 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 TMED7-TICAM2A0A0A6YYA0 188 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 TCRBV3S1A0A5B6 114 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 TRAPPC13A5PLN9 417 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 H3BML4 177 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 LYPD3O95274 346 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 THY1P04216 161 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 PEPDP12955 493 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 CPN1P15169 458 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 POU3F2P20265 443 aaPredicted RBP19.01■□□□□ 0.63
CACNB3-210ENST00000548874 PTGS2P35354 604 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 MAP2K6P52564 334 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 ALG10BQ5I7T1 473 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 C1orf146Q5VVC0 180 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 C3orf33Q6P1S2 294 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 ULK3Q6PHR2 472 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 ADGRG5Q8IZF4 528 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 SLC47A1Q96FL8 570 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 WDYHV1Q96HA8 205 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 PRRC1Q96M27 445 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 PRDM14Q9GZV8 571 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 IL1RAPQ9NPH3 570 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 NDUFAF4Q9P032 175 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 ACAD8Q9UKU7 415 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 A4GNTQ9UNA3 340 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 TMED7Q9Y3B3 224 aa19.01■□□□□ 0.63
CACNB3-210ENST00000548874 NPIPA2E9PIF3 369 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 NPIPA3F8WFD2 350 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 BCKDKO14874 412 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 CIB2O75838 187 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 PRSS23O95084 383 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 OR5F1O95221 314 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 UMPSP11172 480 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 NQO1P15559 274 aaKnown RBP19■□□□□ 0.63
CACNB3-210ENST00000548874 SHC1P29353 583 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 MAGEA2P43356 314 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 CDH12P55289 794 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 PIN1Q13526 163 aaPredicted RBP19■□□□□ 0.63
CACNB3-210ENST00000548874 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19■□□□□ 0.63
CACNB3-210ENST00000548874 POMZP3Q6PJE2 187 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 Q6ZPB1 254 aaPredicted RBP19■□□□□ 0.63
CACNB3-210ENST00000548874 GGNQ86UU5 652 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 LILRA2Q8N149 483 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 FAM57AQ8TBR7 257 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 SLC25A43Q8WUT9 341 aaPredicted RBP19■□□□□ 0.63
CACNB3-210ENST00000548874 SLC38A4Q969I6 547 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 ZNF300Q96RE9 604 aaPredicted RBP19■□□□□ 0.63
CACNB3-210ENST00000548874 SEPHS2Q99611 448 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 TMEM185BQ9H7F4 350 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 SERINC1Q9NRX5 453 aa19■□□□□ 0.63
CACNB3-210ENST00000548874 PRRC2CQ9Y520 2896 aaKnown RBP18.99■□□□□ 0.63
CACNB3-210ENST00000548874 TMEM72A0PK05 275 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 J3KTA2 159 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 FFAR1O14842 300 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 ZNF208O43345 1280 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 CHP2O43745 196 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 GPIP06744 558 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 PNMTP11086 282 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 CXCR1P25024 350 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 CLDN15P56746 228 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 CLDN20P56880 219 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 RBPJQ06330 500 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 C19orf57Q0VDD7 668 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 EMC4Q5J8M3 183 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 LINC00114Q6XXX2 140 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 PIWIL3Q7Z3Z3 882 aaKnown RBP18.99■□□□□ 0.63
CACNB3-210ENST00000548874 GDF7Q7Z4P5 450 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 SPATA24Q86W54 205 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 LSRQ86X29 649 aaPredicted RBP18.99■□□□□ 0.63
CACNB3-210ENST00000548874 GALNT11Q8NCW6 608 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 CANT1Q8WVQ1 401 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 SLC41A3Q96GZ6 507 aa18.99■□□□□ 0.63
CACNB3-210ENST00000548874 ADGRG7Q96K78 797 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms