RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 OIT3Q8WWZ8 545 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 CPNE4Q96A23 557 aaPredicted RBP14.1□□□□□ -0.15
DDX54-205ENST00000548786 GMPPAQ96IJ6 420 aaPredicted RBP14.1□□□□□ -0.15
DDX54-205ENST00000548786 SIKE1Q9BRV8 207 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 CCDC106Q9BWC9 280 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 CACYBPQ9HB71 228 aaKnown RBP14.1□□□□□ -0.15
DDX54-205ENST00000548786 SLC24A3Q9HC58 644 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 A4GALTQ9NPC4 353 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 EXOSC3Q9NQT5 275 aaKnown RBP14.1□□□□□ -0.15
DDX54-205ENST00000548786 DSPPQ9NZW4 1301 aa14.1□□□□□ -0.15
DDX54-205ENST00000548786 OTOGQ6ZRI0 2925 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 CFAP73A6NFT4 308 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 FRS3O43559 492 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 SS18L1O75177 396 aaPredicted RBP14.09□□□□□ -0.15
DDX54-205ENST00000548786 CGAP01215 116 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 PRG2P13727 222 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 MAGEA8P43361 318 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 ARFIP2P53365 341 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 EEF1A1P68104 462 aaKnown RBP14.09□□□□□ -0.15
DDX54-205ENST00000548786 FADDQ13158 208 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 POU4F3Q15319 338 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 SYT14P1Q58G82 188 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 EEF1A1P5Q5VTE0 462 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 GRINAQ7Z429 371 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 DHDDSQ86SQ9 333 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 RETREG3Q86VR2 466 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 CADM2Q8N3J6 435 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 RNF128Q8TEB7 428 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 FAM222BQ8WU58 562 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 STON2Q8WXE9 905 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 ZNF775Q96BV0 537 aaPredicted RBP14.09□□□□□ -0.15
DDX54-205ENST00000548786 KLHL4Q9C0H6 718 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 MED4Q9NPJ6 270 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 THUMPD1Q9NXG2 353 aaKnown RBP14.09□□□□□ -0.15
DDX54-205ENST00000548786 CHRNA9Q9UGM1 479 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 LEF1Q9UJU2 399 aaPredicted RBP14.09□□□□□ -0.15
DDX54-205ENST00000548786 ITGB1BP2Q9UKP3 347 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 NDUFAF1Q9Y375 327 aa14.09□□□□□ -0.15
DDX54-205ENST00000548786 TRBV5-3A0A0A0MS03 114 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 TMED7-TICAM2A0A0A6YYA0 188 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 A0A0G2JPF8 293 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 SH3D21A4FU49 640 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 CDHR4A6H8M9 788 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 HNRNPCL2B2RXH8 293 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 HNRNPCL3B7ZW38 293 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 HNRNPCL1O60812 293 aaKnown RBP14.08□□□□□ -0.16
DDX54-205ENST00000548786 FESP07332 822 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 HNRNPCL4P0DMR1 293 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 POU2F1P14859 743 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 TACR3P29371 465 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 AQP1P29972 269 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 AGTR1P30556 359 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 CD79BP40259 229 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 APOBEC1P41238 236 aaKnown RBP14.08□□□□□ -0.16
DDX54-205ENST00000548786 DIO1P49895 249 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 MTPNP58546 118 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 HOXC5Q00444 222 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 SORDQ00796 357 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 EPS8Q12929 822 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 NFYCQ13952 458 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 SELPLGQ14242 412 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 CAPRIN1Q14444 709 aaKnown RBP14.08□□□□□ -0.16
DDX54-205ENST00000548786 LARS2Q15031 903 aaKnown RBP14.08□□□□□ -0.16
DDX54-205ENST00000548786 ZNF311Q5JNZ3 666 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 ANKRD34AQ69YU3 496 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 DLEU7Q6UYE1 221 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 ZNF550Q7Z398 422 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 CDH24Q86UP0 819 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 ADGRG3Q86Y34 549 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 TUSC5Q8IXB3 177 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 OR6K3Q8NGY3 331 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 BBS10Q8TAM1 723 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 ARL5BQ96KC2 179 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 CPPED1Q9BRF8 314 aaPredicted RBP14.08□□□□□ -0.16
DDX54-205ENST00000548786 POLDIP3Q9BY77 421 aaKnown RBP14.08□□□□□ -0.16
DDX54-205ENST00000548786 TMEM45AQ9NWC5 275 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 KLHL28Q9NXS3 571 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 TMED7Q9Y3B3 224 aa14.08□□□□□ -0.16
DDX54-205ENST00000548786 MPDZO75970 2070 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 TMEM72A0PK05 275 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 A6NNC1 897 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 EVPLLA8MZ36 301 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 SULT2B1O00204 365 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 SMAD9O15198 467 aaKnown RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 CTAG2O75638 210 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 PGM3O95394 542 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 ARAFP10398 606 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 CD8BP10966 210 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 UQCRBP14927 111 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 PPIBP23284 216 aaKnown RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 CCKARP32238 428 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 PEX19P40855 299 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 POLR2HP52434 150 aaKnown RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 RAC3P60763 192 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 IRX1P78414 480 aaPredicted RBP14.07□□□□□ -0.16
DDX54-205ENST00000548786 CDK6Q00534 326 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 TMEM201Q5SNT2 666 aa14.07□□□□□ -0.16
DDX54-205ENST00000548786 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms