RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SLC35A5Q9BS91 424 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 INPP5KQ9BT40 448 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 CCDC106Q9BWC9 280 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 WDR55Q9H6Y2 383 aaPredicted RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF701Q9NV72 531 aaPredicted RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 MARCOQ9UEW3 520 aaPredicted RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 RAI1Q7Z5J4 1906 aaPredicted RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 E9PBE3 544 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 AGR2O95994 175 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 HEXAP06865 529 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 PGCP20142 388 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 IL32P24001 234 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 NTF4P34130 210 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 CDKN2CP42773 168 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 KCNJ10P78508 379 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ITGADQ13349 1161 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 CAPRIN1Q14444 709 aaKnown RBP11.82□□□□□ -0.52
CPSF6-204ENST00000547486 P2RY6Q15077 328 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 SYPL1Q16563 259 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 SYT14P1Q58G82 188 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ATAD3BQ5T9A4 648 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 OGFOD2Q6N063 350 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 Q6ZT83 130 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 RNF130Q86XS8 419 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ADGRG3Q86Y34 549 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 LRRC34Q8IZ02 419 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ANKFN1Q8N957 763 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ANKRD42Q8N9B4 389 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 TMEM234Q8WY98 164 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 HSD17B8Q92506 261 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 KISS1RQ969F8 398 aaPredicted RBP11.82□□□□□ -0.52
CPSF6-204ENST00000547486 DNAJA3Q96EY1 480 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ARL5BQ96KC2 179 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 CTPS2Q9NRF8 586 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 SERINC1Q9NRX5 453 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 AIG1Q9NVV5 245 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 KLHL9Q9P2J3 617 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 BTNL2Q9UIR0 455 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 ROS1P08922 2347 aa11.82□□□□□ -0.52
CPSF6-204ENST00000547486 GOLGA8QA0A0J9YX86 632 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 GOLGA8OA6NCC3 632 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 DPRXA6NFQ7 191 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 CCDC154A6NI56 674 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF724A8MTY0 619 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 GOLGA8NF8WBI6 632 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 SULT2B1O00204 365 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 LYZL6O75951 148 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 CNOT4O95628 575 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 GSNP06396 782 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 FESP07332 822 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 CHRM4P08173 479 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 SOD3P08294 240 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 CHI3L1P36222 383 aaPredicted RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 APOBEC1P41238 236 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 CLNS1AP54105 237 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 DPY19L1Q2PZI1 675 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 GPAT3Q53EU6 434 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 COX20Q5RI15 118 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 ADAM5Q6NVV9 412 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 BHLHA15Q7RTS1 189 aaPredicted RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 MTDHQ86UE4 582 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 PIWIL2Q8TC59 973 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 TMEM171Q8WVE6 324 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 CNOT9Q92600 299 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 ARL8AQ96BM9 186 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 TACO1Q9BSH4 297 aaKnown RBP11.81□□□□□ -0.52
CPSF6-204ENST00000547486 BDH2Q9BUT1 245 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 OR11A1Q9GZK7 315 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 POLE3Q9NRF9 147 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 GPR45Q9Y5Y3 372 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 ARID1AO14497 2285 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 DSCAMO60469 2012 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 HEATR5AQ86XA9 2040 aa11.81□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF716A6NP11 495 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 AP3D1O14617 1153 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 CLOCKO15516 846 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 RAMP1O60894 148 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 SNNO75324 88 aaPredicted RBP11.8□□□□□ -0.52
CPSF6-204ENST00000547486 PGRP06401 933 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 CD3EP07766 207 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 DANCRP0C864 163 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 TFPIP10646 304 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 CCNA2P20248 432 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 IGHV1-2P23083 117 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 EPHA3P29320 983 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 IDH2P48735 452 aaKnown RBP11.8□□□□□ -0.52
CPSF6-204ENST00000547486 KHKP50053 298 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 MAPK11Q15759 364 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 HHATQ5VTY9 493 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 ABLIM2Q6H8Q1 611 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF621Q6ZSS3 439 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 SPATA19Q7Z5L4 167 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 CCDC103Q8IW40 242 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 ARFGAP2Q8N6H7 521 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF563Q8TA94 476 aa11.8□□□□□ -0.52
CPSF6-204ENST00000547486 SLC25A43Q8WUT9 341 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 271.7 ms