RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SLC6A20Q9NP91 592 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SLC35C2Q9NQQ7 365 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 C5AR2Q9P296 337 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 YIPF1Q9Y548 306 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 C17orf113A0A1B0GUU1 675 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 RTCAO00442 366 aaKnown RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 CDC42EP2O14613 210 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 LAG3P18627 525 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 FXYD6P3P58550 94 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 POU4F2Q12837 409 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 APOOLQ6UXV4 268 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 ESPNLQ6ZVH7 1005 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SLC36A1Q7Z2H8 476 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 RNF113BQ8IZP6 322 aaKnown RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SYS1Q8N2H4 156 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 DNAAF1Q8NEP3 725 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 TMIEQ8NEW7 156 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 OR10H4Q8NGA5 316 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 OR52I2Q8NH67 350 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 ZNF461Q8TAF7 563 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 LGALS14Q8TCE9 139 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SMIM19Q96E16 107 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SLC41A3Q96GZ6 507 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 C4orf36Q96KX1 117 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 SLC19A3Q9BZV2 496 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 ARL6Q9H0F7 186 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 OR52D1Q9H346 318 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 NRIP3Q9NQ35 241 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 KLHL28Q9NXS3 571 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 ZNF69Q9UC07 566 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 ZNF223Q9UK11 482 aaPredicted RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 LSM7Q9UK45 103 aaKnown RBP11.29□□□□□ -0.6
ATXN2-216ENST00000546483 PCDHGA5Q9Y5G8 931 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 PLXND1Q9Y4D7 1925 aa11.29□□□□□ -0.6
ATXN2-216ENST00000546483 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 ARPC5O15511 151 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 APOC3P02656 99 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 RAB40ALP0C0E4 278 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 XPAP23025 273 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 PTH2RP49190 550 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 GMFBP60983 142 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 REEP5Q00765 189 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 ILF3Q12906 894 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 GPR68Q15743 365 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 LINC00303Q3SY05 128 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 LRRC73Q5JTD7 316 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 OLIG3Q7RTU3 272 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 UBE3DQ7Z6J8 389 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 TMEM173Q86WV6 379 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 PXT1Q8NFP0 134 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 FCAMRQ8WWV6 532 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 RAB40AQ8WXH6 277 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 NSMAFQ92636 917 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 RSPH9Q9H1X1 276 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 COA4Q9NYJ1 87 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 EPHA6Q9UF33 1036 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 CDHR4A6H8M9 788 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 FAM86C2PA6NEL3 165 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 UNC119BA6NIH7 251 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 RFXAPO00287 272 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 MAN2B1O00754 1011 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 PRAMEF2O60811 474 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 NTSP30990 170 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 GRM7Q14831 915 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 ARHGAP19Q14CB8 494 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 CDK5R1Q15078 307 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 TAF12Q16514 161 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 CSRP2Q16527 193 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 MICBQ29980 383 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 MOB3CQ70IA8 216 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 PAQR7Q86WK9 346 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 TMEM17Q86X19 198 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 CHST14Q8NCH0 376 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 OR52L1Q8NGH7 329 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 OR2A12Q8NGT7 310 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 SMAP2Q8WU79 429 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 BCL7CQ8WUZ0 217 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 HCAR1Q9BXC0 346 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
ATXN2-216ENST00000546483 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 RASL12Q9NYN1 266 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 SLC25A13Q9UJS0 675 aa11.28□□□□□ -0.6
ATXN2-216ENST00000546483 SLC35A3Q9Y2D2 325 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms