RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NPIPA8P0DM63 369 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 CD6P30203 668 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 S100A12P80511 92 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 ABHD12BQ7Z5M8 362 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 RNF175Q8N4F7 328 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 STEAP2Q8NFT2 490 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 TM9SF4Q92544 642 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 TAAR2Q9P1P5 351 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 TMEM212A6NML5 194 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 TMX2-CTNND1H3BSU7 103 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 KLKB1P03952 638 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 CLDN2P57739 230 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 GPR18Q14330 331 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 SMN1Q16637 294 aaKnown RBP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 TBC1D20Q96BZ9 403 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 TUBB1Q9H4B7 451 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 PRSS16Q9NQE7 514 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 USP22Q9UPT9 525 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 GALR3O60755 368 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 APOC3P02656 99 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 DLSTP36957 453 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 CHRNEQ04844 493 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 SF3B4Q15427 424 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 FAM78AQ5JUQ0 283 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 ZSCAN1Q8NBB4 408 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 LRRC46Q96FV0 321 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 MEN1O00255 615 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF761Q86XN6 746 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 LACC1Q8IV20 430 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 OR9A4Q8NGU2 314 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 OR52N1Q8NH53 320 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 SLC25A18Q9H1K4 315 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 EGLN3Q9H6Z9 239 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 CXorf36Q9H7Y0 433 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 NOX3Q9HBY0 568 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 SLC6A20Q9NP91 592 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 H0YGG7 62 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 HTR3BO95264 441 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 IGLV3-27P01718 113 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 PKLRP30613 574 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ARF3P61204 181 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 FOXK1P85037 733 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OTUD1Q5VV17 481 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 TMEM207Q6UWW9 146 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 DLEU7Q6UYE1 221 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 GLB1L2Q8IW92 636 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 AMDHD1Q96NU7 426 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OR5B2Q96R09 309 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 TPSD1Q9BZJ3 242 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 NAA50Q9GZZ1 169 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 THAP10Q9P2Z0 257 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SERPINA5P05154 406 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 BMP4P12644 408 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 RAC2P15153 192 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 CSNK1A1P48729 337 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OR7A5Q15622 319 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 C19orf47Q8N9M1 422 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 VN1R2Q8NFZ6 395 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OR4F15Q8NGB8 312 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OR56B4Q8NH76 319 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 TOE1Q96GM8 510 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SEMA4GQ9NTN9 838 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 CXorf51AA0A1B0GTR3 108 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF28P17035 718 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 TECPR1Q7Z6L1 1165 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 CMTM1Q8IZ96 169 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ASB12Q8WXK4 309 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 CNTNAP3BQ96NU0 1288 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 PDFQ9HBH1 243 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 NRIP3Q9NQ35 241 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 UGT2A1Q9Y4X1 527 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 OR2A25A4D2G3 310 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 FAM171A2A8MVW0 826 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF705EA8MWA4 302 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 MPIG6BO95866 241 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 IGHG1P01857 330 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 PSMB10P40306 273 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 RAP2BP61225 183 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 LTBQ06643 244 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 FGFBP1Q14512 234 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SLC48A1Q6P1K1 146 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 TMEM64Q6YI46 380 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF436Q9C0F3 470 aaPredicted RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 LMAN1LQ9HAT1 526 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SSC5DA1L4H1 1573 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SULT2B1O00204 365 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF264O43296 627 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 UBBP0CG47 229 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 UBCP0CG48 685 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SNRPD2P62316 118 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 RPS27AP62979 156 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
COL4A6-209ENST00000545689 BLOC1S1P78537 153 aa11.68□□□□□ -0.54
COL4A6-209ENST00000545689 SLC35D3Q5M8T2 416 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms