RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 EIF2B1Q14232 305 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 PDK3Q15120 406 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 RAB35Q15286 201 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SIX1Q15475 284 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 TPSAB1Q15661 275 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 CYBRD1Q53TN4 286 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ACER2Q5QJU3 275 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SLX4IPQ5VYV7 408 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 FAM219BQ5XKK7 198 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 APOOLQ6UXV4 268 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ZYG11AQ6WRX3 759 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SYT10Q6XYQ8 523 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 STOX1Q6ZVD7 989 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ASCL5Q7RTU5 278 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF683Q8IZ20 524 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SLC38A6Q8IZM9 456 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 TRMT10AQ8TBZ6 339 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 M1APQ8TC57 530 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ACER1Q8TDN7 264 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 TUBGCP3Q96CW5 907 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 PRICKLE1Q96MT3 831 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 OMDQ99983 421 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 HSD17B14Q9BPX1 270 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 CAPS2Q9BXY5 557 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 GCOM2Q9BZD3 368 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 RNF41Q9H4P4 317 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 POLD4Q9HCU8 107 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 APMAPQ9HDC9 416 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 FANCFQ9NPI8 374 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 BARHL2Q9NY43 387 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 MLXQ9UH92 298 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 ANAPC7Q9UJX3 599 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 RARRES3Q9UL19 164 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 SPATA2Q9UM82 520 aa3.32□□□□□ -1.88
SNHG1-222ENST00000545308 EIF3LQ9Y262 564 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 MYO5AQ9Y4I1 1855 aaKnown RBP3.32□□□□□ -1.88
SNHG1-222ENST00000545308 VPS13AQ96RL7 3174 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 KMT2BQ9UMN6 2715 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 SCN10AQ9Y5Y9 1956 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TEX48A0A1B0GUV7 120 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 BCLAF3A2AJT9 711 aaKnown RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 EPOPA6NHQ4 379 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 CCDC169A6NNP5 214 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 C5orf67F2Z3F1 127 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 PPIHO43447 177 aaKnown RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TYROBPO43914 113 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 STX11O75558 287 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 SEMA4FO95754 770 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 HOXB8P17481 243 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 CALB2P22676 271 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 RPL4P36578 427 aaKnown RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 BDKRB1P46663 353 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 ATP4BP51164 291 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 BEX3Q00994 111 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 ATXN7L3Q14CW9 347 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 FASTKD3Q14CZ7 662 aaKnown RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 ZMYND11Q15326 602 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 MS4A18Q3C1V0 323 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TCEAL5Q5H9L2 206 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 C10orf120Q5SQS8 335 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 OTUD3Q5T2D3 398 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 HSD11B1LQ7Z5J1 315 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 VSTM4Q8IW00 320 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 CDH26Q8IXH8 852 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TMEM123Q8N131 208 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 Q8NBF4 154 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 PIGCQ92535 297 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TAF15Q92804 592 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 NT5C3BQ969T7 300 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 ART5Q96L15 291 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 AMDHD1Q96NU7 426 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 POLR3FQ9H1D9 316 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 TM9SF3Q9HD45 589 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 MEPEQ9NQ76 525 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-222ENST00000545308 AIPL1Q9NZN9 384 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 GNG12Q9UBI6 72 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 CIDEBQ9UHD4 219 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 FRYLO94915 3013 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 FER1L5A0AVI2 2057 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 FANCMQ8IYD8 2048 aa3.31□□□□□ -1.88
SNHG1-222ENST00000545308 SIPA1L1O43166 1804 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 GRIN2DO15399 1336 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 DMXL1Q9Y485 3027 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 XKRY2A2RUG3 117 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 SOCS3O14543 225 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF208O43345 1280 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 IDH3BO43837 385 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 B4GALT2O60909 372 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 IGHV3-9P01782 118 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF44P15621 663 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 ZNF10P21506 573 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-222ENST00000545308 TBXA2RP21731 343 aa3.3□□□□□ -1.88
SNHG1-222ENST00000545308 SLC1A4P43007 532 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms