RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 RAB33BQ9H082 229 aa3.69□□□□□ -1.82
COPA-206ENST00000545266 MAGT1Q9H0U3 335 aa3.69□□□□□ -1.82
COPA-206ENST00000545266 AP1M2Q9Y6Q5 423 aa3.69□□□□□ -1.82
COPA-206ENST00000545266 XPO1O14980 1071 aaKnown RBP3.68□□□□□ -1.82
COPA-206ENST00000545266 SNAPINO95295 136 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 IQCF3P0C7M6 154 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 TSPY4P0CV99 314 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 TSPY10P0CW01 314 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 UQCRC2P22695 453 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 ADSSP30520 456 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 HPDP32754 393 aaPredicted RBP3.68□□□□□ -1.82
COPA-206ENST00000545266 TLE4Q04727 773 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 KLHL30Q0D2K2 578 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 CUL1Q13616 776 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 MESDQ14696 234 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 USH1GQ495M9 461 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 C11orf71Q6IPW1 123 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 SLC25A24Q6NUK1 477 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 ACOT7LQ6ZUV0 252 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 ARCQ7LC44 396 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 ACOT1Q86TX2 421 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 NRMQ8IXM6 262 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 OR52I1Q8NGK6 324 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 OR56B4Q8NH76 319 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
COPA-206ENST00000545266 SH3YL1Q96HL8 342 aaPredicted RBP3.68□□□□□ -1.82
COPA-206ENST00000545266 TUBGCP2Q9BSJ2 902 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 ALG12Q9BV10 488 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 APMAPQ9HDC9 416 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 PHF11Q9UIL8 331 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 AK6Q9Y3D8 172 aaKnown RBP3.68□□□□□ -1.82
COPA-206ENST00000545266 UGT2A1Q9Y4X1 527 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 MAD1L1Q9Y6D9 718 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 CDH10Q9Y6N8 788 aa3.68□□□□□ -1.82
COPA-206ENST00000545266 PLEKHG1Q9ULL1 1385 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 A0A0J9YXY3 114 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 A0A1W2PNU3 283 aaPredicted RBP3.67□□□□□ -1.82
COPA-206ENST00000545266 PINLYPA6NC86 204 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 NDC80O14777 642 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 CXCL13O43927 109 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 GUCA1CO95843 209 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 NR2C1P13056 603 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 MMP11P24347 488 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 UGT1A5P35504 534 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 RGS4P49798 205 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 HSPA2P54652 639 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 NUP107P57740 925 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 DAZ2Q13117 558 aaKnown RBP3.67□□□□□ -1.82
COPA-206ENST00000545266 PDK4Q16654 411 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 SLC25A52Q3SY17 297 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 VRK2Q86Y07 508 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 NKAPP1Q8N9T2 125 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 GMCL1P1Q8NEA9 526 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 OR4D9Q8NGE8 314 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 PELI1Q96FA3 418 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 TMEM101Q96IK0 257 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 PGLYRP4Q96LB8 373 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 SENP8Q96LD8 212 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 EBF4Q9BQW3 602 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 NXF5Q9H1B4 397 aaKnown RBP3.67□□□□□ -1.82
COPA-206ENST00000545266 DAZ3Q9NR90 486 aaKnown RBP3.67□□□□□ -1.82
COPA-206ENST00000545266 IFT52Q9Y366 437 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 NEUROG3Q9Y4Z2 214 aa3.67□□□□□ -1.82
COPA-206ENST00000545266 FRMPD3Q5JV73 1810 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 KRTAP4-16G5E9R7 235 aaPredicted RBP3.66□□□□□ -1.82
COPA-206ENST00000545266 TPST2O60704 377 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 SUPT7LO94864 414 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 MDKP21741 143 aaPredicted RBP3.66□□□□□ -1.82
COPA-206ENST00000545266 HNRNPA2B1P22626 353 aaKnown RBP3.66□□□□□ -1.82
COPA-206ENST00000545266 CCNE1P24864 410 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 YWHABP31946 246 aaKnown RBP3.66□□□□□ -1.82
COPA-206ENST00000545266 TDO2P48775 406 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 DAP3P51398 398 aaKnown RBP3.66□□□□□ -1.82
COPA-206ENST00000545266 APOC4P55056 127 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 CBX1P83916 185 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 ARL6IP1Q15041 203 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 ZNF530Q6P9A1 599 aaPredicted RBP3.66□□□□□ -1.82
COPA-206ENST00000545266 ZNF683Q8IZ20 524 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 SLC34A3Q8N130 599 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 CLEC4FQ8N1N0 589 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 ANKFN1Q8N957 763 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 STXBP6Q8NFX7 210 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 OR1F12Q8NHA8 337 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 NEIL3Q8TAT5 605 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 SPATA16Q9BXB7 569 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 RMND5AQ9H871 391 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 BTNL2Q9UIR0 455 aa3.66□□□□□ -1.82
COPA-206ENST00000545266 USP27XA6NNY8 438 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 ZNF780AO75290 641 aaPredicted RBP3.65□□□□□ -1.83
COPA-206ENST00000545266 LGI1O95970 557 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 LGALS2P05162 132 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 PTMAP06454 111 aaKnown RBP3.65□□□□□ -1.83
COPA-206ENST00000545266 FGF9P31371 208 aaPredicted RBP3.65□□□□□ -1.83
COPA-206ENST00000545266 LEPP41159 167 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 CAV2P51636 162 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 C1orf61Q13536 156 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 RIPK1Q13546 671 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 TPD52L1Q16890 204 aaPredicted RBP3.65□□□□□ -1.83
COPA-206ENST00000545266 TP53I3Q53FA7 332 aa3.65□□□□□ -1.83
COPA-206ENST00000545266 TTC23Q5W5X9 447 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms