RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZNF385DQ9H6B1 395 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 BCL2L10Q9HD36 194 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 ELOVL5Q9NYP7 299 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 VAPAQ9P0L0 249 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 CHRNA9Q9UGM1 479 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 PRDM4Q9UKN5 801 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 CLEC4AQ9UMR7 237 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 IFT52Q9Y366 437 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 GMEB1Q9Y692 573 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 DSPPQ9NZW4 1301 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 PCNX3Q9H6A9 2034 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 ITPR2Q14571 2701 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 A0A1W2PNR3 127 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 CDHR4A6H8M9 788 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 FAAHO00519 579 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 PRKD3O94806 890 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 CGAP01215 116 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 NUDT7P0C024 238 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 TFPIP10646 304 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 EPXP11678 715 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 CD79BP40259 229 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 ARFIP2P53365 341 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 CSNK2A1P68400 391 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-216ENST00000544996 SYT14P1Q58G82 188 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 RPS26P11Q5JNZ5 115 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-216ENST00000544996 TMEM201Q5SNT2 666 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 RNF220Q5VTB9 566 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF836Q6ZNA1 936 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 FCRLAQ7L513 359 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 STK32CQ86UX6 486 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 VRK2Q86Y07 508 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 SLC43A2Q8N370 569 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF610Q8N9Z0 462 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 BBS10Q8TAM1 723 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 LINC01560Q8TB33 94 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 RNF128Q8TEB7 428 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 SRXN1Q9BYN0 137 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 COQ10BQ9H8M1 238 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 GP6Q9HCN6 339 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 FANCFQ9NPI8 374 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 CTPS2Q9NRF8 586 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 PLSCR4Q9NRQ2 329 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 RLIMQ9NVW2 624 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF443Q9Y2A4 671 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-216ENST00000544996 DOCK7Q96N67 2140 aa14.06□□□□□ -0.16
CCDC78-216ENST00000544996 INTS1Q8N201 2190 aaKnown RBP14.05□□□□□ -0.16
CCDC78-216ENST00000544996 TRBV5-3A0A0A0MS03 114 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 SULT2B1O00204 365 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 AP3D1O14617 1153 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ADAM11O75078 769 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 POU2F1P14859 743 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ETS2P15036 469 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 GPX2P18283 190 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ENPP1P22413 925 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 SLC1A3P43003 542 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 CLK1P49759 484 aaKnown RBP14.05□□□□□ -0.16
CCDC78-216ENST00000544996 POLR2HP52434 150 aaKnown RBP14.05□□□□□ -0.16
CCDC78-216ENST00000544996 MAP2K6P52564 334 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 KRTAP10-9P60411 292 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 COPZ1P61923 177 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 PLAURQ03405 335 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF311Q5JNZ3 666 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF474Q6S9Z5 364 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-216ENST00000544996 DLEU7Q6UYE1 221 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 TMPPEQ6ZT21 453 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF550Q7Z398 422 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ADGRG3Q86Y34 549 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 KRT73Q86Y46 540 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 DPP10Q8N608 796 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 ABHD3Q8WU67 409 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 DACH2Q96NX9 599 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 TACO1Q9BSH4 297 aaKnown RBP14.05□□□□□ -0.16
CCDC78-216ENST00000544996 SPATA9Q9BWV2 254 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 CCDC134Q9H6E4 229 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 KLHL9Q9P2J3 617 aa14.05□□□□□ -0.16
CCDC78-216ENST00000544996 A6NNC1 897 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 CASKO14936 926 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 CTAG2O75638 210 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 PGM3O95394 542 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 ARAFP10398 606 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 CD1EP15812 388 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 SLC6A2P23975 617 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 TACR3P29371 465 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 AGTR1P30556 359 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 MDH1P40925 334 aaKnown RBP14.04□□□□□ -0.16
CCDC78-216ENST00000544996 DIO1P49895 249 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 CDK6Q00534 326 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 FAM27E3Q08E93 113 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 EPS8Q12929 822 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 DAZAP2Q15038 168 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-216ENST00000544996 FBXW10Q5XX13 1052 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 REEP3Q6NUK4 255 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 DHDDSQ86SQ9 333 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 NFKBIDQ8NI38 313 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 ZHX1-C8orf76Q96EF9 292 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 SPATA5L1Q9BVQ7 753 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 TMEM38AQ9H6F2 299 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 KLHL13Q9P2N7 655 aa14.04□□□□□ -0.16
CCDC78-216ENST00000544996 HDGFL3Q9Y3E1 203 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms