RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 EMC3Q9P0I2 261 aa5.67□□□□□ -1.5
CIT-215ENST00000544800 CRNNQ9UBG3 495 aaPredicted RBP5.67□□□□□ -1.5
CIT-215ENST00000544800 BCAP29Q9UHQ4 241 aa5.67□□□□□ -1.5
CIT-215ENST00000544800 PHF11Q9UIL8 331 aa5.67□□□□□ -1.5
CIT-215ENST00000544800 ZNF346Q9UL40 294 aaKnown RBP5.67□□□□□ -1.5
CIT-215ENST00000544800 EFR3BQ9Y2G0 817 aa5.67□□□□□ -1.5
CIT-215ENST00000544800 GPR55Q9Y2T6 319 aaPredicted RBP5.67□□□□□ -1.5
CIT-215ENST00000544800 KCNE2Q9Y6J6 123 aa5.67□□□□□ -1.5
CIT-215ENST00000544800 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
CIT-215ENST00000544800 IGLV3-32A0A0A0MS00 114 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 IGHV3-15A0A0B4J1V0 119 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 BTBD17A6NE02 478 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 GJE1A6NN92 205 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 GAS8O95995 478 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 C8GP07360 202 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 C1GALT1C1LP0DN25 315 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 SHC1P29353 583 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 GRIA1P42261 906 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 SLC1A1P43005 524 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 MAGEB1P43366 347 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 CLK3P49761 638 aaKnown RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 RAC3P60763 192 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 C17orf67Q0P5P2 114 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 CSTF3Q12996 717 aaKnown RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 PCGF3Q3KNV8 242 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 TTMPQ5BVD1 217 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 USP51Q70EK9 711 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 KRT78Q8N1N4 520 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 OTUD6BQ8N6M0 293 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 FAM169BQ8N8A8 192 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 DTX3Q8N9I9 347 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 FAM71DQ8N9W8 422 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 OR52E4Q8NGH9 312 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 GIMAP7Q8NHV1 300 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 EPS8L3Q8TE67 593 aaKnown RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 IPCEF1Q8WWN9 437 aaPredicted RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 DNAJA3Q96EY1 480 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 ITCHQ96J02 903 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 MRGPRX4Q96LA9 322 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 BBS4Q96RK4 519 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 DNAJC7Q99615 494 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 NPAS1Q99742 590 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 RHOXF2Q9BQY4 288 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 MCRIP2Q9BUT9 160 aaKnown RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 TRIM15Q9C019 465 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 PITHD1Q9GZP4 211 aaPredicted RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 MYLK2Q9H1R3 596 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 VPS11Q9H270 941 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 SAYSD1Q9NPB0 183 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 ACOXLQ9NUZ1 547 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 NKIRAS2Q9NYR9 191 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 FRRS1LQ9P0K9 344 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 VPREB3Q9UKI3 123 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 NOSIPQ9Y314 301 aaKnown RBP5.66□□□□□ -1.5
CIT-215ENST00000544800 TCAF1Q9Y4C2 921 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
CIT-215ENST00000544800 GLOD5A6NK44 160 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 RTCAO00442 366 aaKnown RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 PSMD3O43242 534 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 PSTPIP1O43586 416 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 CLIC3O95833 236 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 IGLV1-44P01699 117 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 NAT2P11245 290 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 SSR2P43308 183 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 PCBP3P57721 371 aaKnown RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 ZBED6P86452 979 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 PAX2Q02962 417 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 SLC3A1Q07837 685 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 SNTB2Q13425 540 aaKnown RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 MAD2L1BPQ15013 274 aaPredicted RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 SLC18A3Q16572 532 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 TMEM176BQ3YBM2 270 aaPredicted RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 HIKESHIQ53FT3 197 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 PPP1R21Q6ZMI0 780 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 VN1R5Q7Z5H4 357 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 LINC00523Q86TU6 105 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 THOC6Q86W42 341 aaKnown RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 KATNAL2Q8IYT4 538 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 LINC00482Q8N8I6 264 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 GATAD2BQ8WXI9 593 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 ALG3Q92685 438 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 KRT35Q92764 455 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 C3orf30Q96M34 536 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 RBBP8Q99708 897 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 RTN4RQ9BZR6 473 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 SERHL2Q9H4I8 314 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 PATZ1Q9HBE1 687 aaKnown RBP5.65□□□□□ -1.5
CIT-215ENST00000544800 CHRAC1Q9NRG0 131 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 ANO10Q9NW15 660 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 UPB1Q9UBR1 384 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 HIF3AQ9Y2N7 669 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 DHRS7Q9Y394 339 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.65□□□□□ -1.5
CIT-215ENST00000544800 SMAD5-AS1Q9Y6J3 95 aa5.65□□□□□ -1.5
CIT-215ENST00000544800 IGKV3D-15A0A087WSY6 115 aa5.64□□□□□ -1.51
CIT-215ENST00000544800 IGHV2OR16-5A0A0B4J2B6 119 aa5.64□□□□□ -1.51
CIT-215ENST00000544800 GOLGA8KD6RF30 607 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms