RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SEC14L5O43304 696 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TPST2O60704 377 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PRKD3O94806 890 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 NTN1O95631 604 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OPN1LWP04000 364 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CCNA2P20248 432 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 IL11P20809 199 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 LHX2P50458 406 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RAC1P63000 192 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TRAP1Q12931 704 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SELENBP1Q13228 472 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 NPTX1Q15818 432 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C3AR1Q16581 482 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 MTX3Q5HYI7 312 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 LCN8Q6JVE9 175 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C3orf33Q6P1S2 294 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZNF585AQ6P3V2 769 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ASRGL1Q7L266 308 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CD163Q86VB7 1156 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PM20D2Q8IYS1 436 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 LSMEM1Q8N8F7 131 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PYURFQ96I23 114 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SH3BGRL2Q9UJC5 107 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OSGIN2Q9Y236 505 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 POMPQ9Y244 141 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SPIN1Q9Y657 262 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SMG1Q96Q15 3661 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TMED7-TICAM2A0A0A6YYA0 188 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 A0A1B0GWA3 101 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 GJE1A6NN92 205 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 H0Y3Z8 333 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FMO6PO60774 539 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 IFNW1P05000 195 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZNF708P17019 499 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 GNLYP22749 145 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CXCR1P25024 350 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SFTPDP35247 375 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CASP6P55212 293 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 DLX5P56178 289 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TAS2R41P59536 307 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 KCNC4Q03721 635 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FLOT2Q14254 428 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ALG10BQ5I7T1 473 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 MEIOBQ8N635 442 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FAM86B1Q8N7N1 296 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 DNAJA4Q8WW22 397 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 WDYHV1Q96HA8 205 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ADAM19Q9H013 955 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CHRNA9Q9UGM1 479 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC7A8Q9UHI5 535 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OSGIN1Q9UJX0 560 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZNF835Q9Y2P0 537 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TMED7Q9Y3B3 224 aa13.06□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TRGV8A0A0C4DH27 118 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ELOA3DA6NLF2 546 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 EIF1AYO14602 144 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ACOT8O14734 319 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 EFNA2O43921 213 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TFPIP10646 304 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CPN1P15169 458 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC7A1P30825 629 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 IFNA8P32881 189 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 YAP1P46937 504 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 UQCRFS1P47985 274 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CLDN18P56856 261 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CLDN20P56880 219 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 BCL2A1Q16548 175 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ELOA3BQ3SY89 546 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TMEM176BQ3YBM2 270 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZNF613Q6PF04 617 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ULK3Q6PHR2 472 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 YTHDF3Q7Z739 585 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ADGRG3Q86Y34 549 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ELOA3Q8NG57 546 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PRR7Q8TB68 274 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C3orf49Q96BT1 292 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 AMBRA1Q9C0C7 1298 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
TNFRSF1A-216ENST00000543995 A0A0B4J2E0 115 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 A0A1B0GX12 115 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FIGNL2A6NMB9 653 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CIB2O75838 187 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RPS3AP61247 264 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FOXD4Q12950 439 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZSCAN26Q16670 478 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 EIF2S3LQ2VIR3 472 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 Q6ZPB1 254 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC25A43Q8WUT9 341 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 DDIT4LQ96D03 193 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC47A1Q96FL8 570 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms