RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 LRR1Q96L50 414 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 IMMP1LQ96LU5 166 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 ZNF582Q96NG8 517 aaPredicted RBP18.12■□□□□ 0.49
COPS7A-218ENST00000543939 TEX12Q9BXU0 123 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 SLC19A3Q9BZV2 496 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 SPRY4Q9C004 299 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 ENKD1Q9H0I2 346 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 MED17Q9NVC6 651 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 MYOTQ9UBF9 498 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 IL20RAQ9UHF4 553 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 PADI1Q9ULC6 663 aa18.12■□□□□ 0.49
COPS7A-218ENST00000543939 RPL36Q9Y3U8 105 aaKnown RBP18.12■□□□□ 0.49
COPS7A-218ENST00000543939 IGKV1D-42A0A075B6H8 117 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 A0A1W2PNU3 283 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-218ENST00000543939 C17orf51A8MQB3 221 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 SCO2O43819 266 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 CH25HO95992 272 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 HMGN1P05114 100 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 CD63P08962 238 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 COX6A1P12074 109 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 BMP7P18075 431 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 FOLR3P41439 243 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 SLC1A3P43003 542 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 ZNF91Q05481 1191 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 TCF15Q12870 199 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 FHL1Q13642 323 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 TBCEQ15813 527 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-218ENST00000543939 UBE2UQ5VVX9 321 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 SMARCD3Q6STE5 483 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 LYPD8Q6UX82 237 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 TIPARPQ7Z3E1 657 aaKnown RBP18.11■□□□□ 0.49
COPS7A-218ENST00000543939 PIP4P1Q86T03 277 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 OR5W2Q8NH69 310 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 SGTBQ96EQ0 304 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 DOK1Q99704 481 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 ADAM19Q9H013 955 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 C12orf10Q9HB07 376 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 PCDHGA3Q9Y5H0 932 aa18.11■□□□□ 0.49
COPS7A-218ENST00000543939 CCDC187A0A096LP49 1063 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 ELOA3DA6NLF2 546 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-218ENST00000543939 BHLHE40O14503 412 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 PLD2O14939 933 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 DBTP11182 482 aaKnown RBP18.1■□□□□ 0.49
COPS7A-218ENST00000543939 GRK5P34947 590 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 BTBD16Q32M84 506 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 ELOA3BQ3SY89 546 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 PLAG1Q6DJT9 500 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 THSD4Q6ZMP0 1018 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 OAFQ86UD1 273 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 CYP4Z2PQ8N1L4 340 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 ELOA3Q8NG57 546 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 ZNF563Q8TA94 476 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 RNF138Q8WVD3 245 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 FCGR1BQ92637 280 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 DEPDC7Q96QD5 511 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 TMEM43Q9BTV4 400 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 CDCA4Q9BXL8 241 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 DEFB126Q9BYW3 111 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 GPR52Q9Y2T5 361 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 COMMD3-BMI1R4GMX3 469 aa18.1■□□□□ 0.49
COPS7A-218ENST00000543939 TRAV27A0A087WT01 109 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 A0A1W2PQ72 361 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 HTR3EA5X5Y0 456 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 KDM4EB2RXH2 506 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-218ENST00000543939 C9orf172C9J069 976 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 MAN1A2O60476 641 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 LRP3O75074 770 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 IGF2P01344 180 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 IGHEP01854 428 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 ADRA2AP08913 450 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 P2RX1P51575 399 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 MLLT10P55197 1068 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 EXT1Q16394 746 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 DHRS13Q6UX07 377 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 B3GNT6Q6ZMB0 384 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 NUP54Q7Z3B4 507 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 MISPQ8IVT2 679 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 LNX2Q8N448 690 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 OR5M3Q8NGP4 307 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 OR51A7Q8NH64 312 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 TTC9Q92623 222 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 TMCO6Q96DC7 493 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 TNFRSF13CQ96RJ3 184 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 TSC22D3Q99576 134 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 NAA50Q9GZZ1 169 aaKnown RBP18.09■□□□□ 0.49
COPS7A-218ENST00000543939 MCCC2Q9HCC0 563 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 PTTG2Q9NZH5 202 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 OTOGLQ3ZCN5 2332 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 SDK2Q58EX2 2172 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 PRODHO43272 600 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 LCKP06239 509 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 PGCP20142 388 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 TGM1P22735 817 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 ITPKBP27987 946 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 TMBIM6P55061 237 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 EIF3IQ13347 325 aaKnown RBP18.09■□□□□ 0.49
COPS7A-218ENST00000543939 ALDH16A1Q8IZ83 802 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 SLC43A2Q8N370 569 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 ANKK1Q8NFD2 765 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 CT55Q8WUE5 264 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms