RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 HSH2DQ96JZ2 352 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 NSMCE2Q96MF7 247 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 ZNF559Q9BR84 538 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 CADM1Q9BY67 442 aaKnown RBP12.29□□□□□ -0.44
SP140-213ENST00000543928 TRIM2Q9C040 744 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 PRDM14Q9GZV8 571 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 CTPS2Q9NRF8 586 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 DCAF13Q9NV06 445 aaKnown RBP12.29□□□□□ -0.44
SP140-213ENST00000543928 STOML1Q9UBI4 398 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 SH3BGRL2Q9UJC5 107 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 TINAGQ9UJW2 476 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 RPS6KA6Q9UK32 745 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 PRDM4Q9UKN5 801 aa12.29□□□□□ -0.44
SP140-213ENST00000543928 H0Y3Z8 333 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 H0YC42 278 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 SEC14L5O43304 696 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 OPN1LWP04000 364 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 CPN1P15169 458 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 ATP6V1B2P21281 511 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 SFTPDP35247 375 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 OR1E2P47887 323 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
SP140-213ENST00000543928 SUCLG1P53597 346 aaKnown RBP12.28□□□□□ -0.44
SP140-213ENST00000543928 CASP6P55212 293 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 TPD52P55327 224 aaPredicted RBP12.28□□□□□ -0.44
SP140-213ENST00000543928 CLDN20P56880 219 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 RAC1P63000 192 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 MS4A2Q01362 244 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 OR1Q1Q15612 314 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 BCL2A1Q16548 175 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 IFI44LQ53G44 452 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 C1QL3Q5VWW1 255 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 PGM2L1Q6PCE3 622 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 CYP2R1Q6VVX0 501 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 FKBP9P1Q75LS8 142 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
SP140-213ENST00000543928 ADGRG3Q86Y34 549 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 PM20D2Q8IYS1 436 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 EID3Q8N140 333 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 LILRA2Q8N149 483 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 MEIOBQ8N635 442 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 LSMEM1Q8N8F7 131 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 RELTQ969Z4 430 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 MCUR1Q96AQ8 359 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 C3orf49Q96BT1 292 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 MCHR1Q99705 422 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 ADAM19Q9H013 955 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 LRMDAQ9H2I8 198 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 MUC13Q9H3R2 512 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 TMEM27Q9HBJ8 222 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 SERINC1Q9NRX5 453 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 ACTR3BQ9P1U1 418 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 RPS6KB2Q9UBS0 482 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 OSGIN1Q9UJX0 560 aa12.28□□□□□ -0.44
SP140-213ENST00000543928 SAMD4AQ9UPU9 718 aaKnown RBP12.28□□□□□ -0.44
SP140-213ENST00000543928 TMED7-TICAM2A0A0A6YYA0 188 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 A0A1B0GWA3 101 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 FIGNL2A6NMB9 653 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 CPSF4LA6NMK7 179 aaKnown RBP12.27□□□□□ -0.45
SP140-213ENST00000543928 J3QKU1 62 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 FMO6PO60774 539 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 STSP08842 583 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 CCNA2P20248 432 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 SHC1P29353 583 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 CA7P43166 264 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 CLDN15P56746 228 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 GABPB1Q06547 395 aaPredicted RBP12.27□□□□□ -0.45
SP140-213ENST00000543928 TMEM176BQ3YBM2 270 aaPredicted RBP12.27□□□□□ -0.45
SP140-213ENST00000543928 ENTPD8Q5MY95 495 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 LCN8Q6JVE9 175 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 C3P1Q6ZMU1 363 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 DEF8Q6ZN54 512 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 GGNQ86UU5 652 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 DHFR2Q86XF0 187 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 ULK2Q8IYT8 1036 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 FAM86B1Q8N7N1 296 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 GEMIN6Q8WXD5 167 aaKnown RBP12.27□□□□□ -0.45
SP140-213ENST00000543928 ASB9Q96DX5 294 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 TP63Q9H3D4 680 aaPredicted RBP12.27□□□□□ -0.45
SP140-213ENST00000543928 CHRNA9Q9UGM1 479 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 TMED7Q9Y3B3 224 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 SPIN1Q9Y657 262 aaPredicted RBP12.27□□□□□ -0.45
SP140-213ENST00000543928 V9GYQ6 96 aa12.27□□□□□ -0.45
SP140-213ENST00000543928 HIVEP3Q5T1R4 2406 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 A0A0B4J2E0 115 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 A0A0J9YW62 118 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 A0A1B0GX12 115 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 TMEM72A0PK05 275 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 GJE1A6NN92 205 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 AHRRA9YTQ3 701 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 EIF1AYO14602 144 aaKnown RBP12.26□□□□□ -0.45
SP140-213ENST00000543928 WDR1O75083 606 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 PRKD3O94806 890 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 STAMBPO95630 424 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 GABRA1P14867 456 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 CXCR1P25024 350 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 ACVR2AP27037 513 aa12.26□□□□□ -0.45
SP140-213ENST00000543928 KCNC4Q03721 635 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms