RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 UBOX5O94941 541 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 LGI1O95970 557 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 UQCRBP14927 111 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 APOBEC1P41238 236 aaKnown RBP13.57□□□□□ -0.24
CD9-210ENST00000543916 SLC1A3P43003 542 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 NRF1Q16656 503 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
CD9-210ENST00000543916 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 C3orf33Q6P1S2 294 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 MTFR2Q6P444 385 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 C16orf89Q6UX73 402 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 LACC1Q8IV20 430 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 CADM2Q8N3J6 435 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 OR4D11Q8NGI4 311 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 SSC4DQ8WTU2 575 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 FIG4Q92562 907 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 ZNF845Q96IR2 970 aaPredicted RBP13.57□□□□□ -0.24
CD9-210ENST00000543916 KLHL15Q96M94 604 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 PRR14Q9BWN1 585 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 ADAM19Q9H013 955 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 NDE1Q9NXR1 346 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 KLHL28Q9NXS3 571 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 STOML1Q9UBI4 398 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 OSGIN1Q9UJX0 560 aa13.57□□□□□ -0.24
CD9-210ENST00000543916 RP1L1Q8IWN7 2480 aaPredicted RBP13.57□□□□□ -0.24
CD9-210ENST00000543916 USP9XQ93008 2570 aaPredicted RBP13.56□□□□□ -0.24
CD9-210ENST00000543916 CD8B2A6NJW9 211 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 ADAMDEC1O15204 470 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 GSTA4O15217 222 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 TPST2O60704 377 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 FESP07332 822 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 C8BP07358 591 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 NCK1P16333 377 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 HTR2AP28223 471 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 TACR3P29371 465 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 POLR2HP52434 150 aaKnown RBP13.56□□□□□ -0.24
CD9-210ENST00000543916 RGS8P57771 180 aaPredicted RBP13.56□□□□□ -0.24
CD9-210ENST00000543916 SF3B4Q15427 424 aaKnown RBP eCLIP13.56□□□□□ -0.24
CD9-210ENST00000543916 NPTX1Q15818 432 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 TMEM176BQ3YBM2 270 aaPredicted RBP13.56□□□□□ -0.24
CD9-210ENST00000543916 CYBRD1Q53TN4 286 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 WBP2NLQ6ICG8 309 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 ADGRG3Q86Y34 549 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 TNIP2Q8NFZ5 429 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 OR10D3Q8NH80 312 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 OR2V1Q8NHB1 315 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 ITLN2Q8WWU7 325 aaPredicted RBP13.56□□□□□ -0.24
CD9-210ENST00000543916 C3orf49Q96BT1 292 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 UCN2Q96RP3 112 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 COQ10BQ9H8M1 238 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 CALHM2Q9HA72 323 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 SERINC1Q9NRX5 453 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 TESQ9UGI8 421 aaKnown RBP13.56□□□□□ -0.24
CD9-210ENST00000543916 CHRNA9Q9UGM1 479 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 CD300AQ9UGN4 299 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 EGFL7Q9UHF1 273 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 SLC13A4Q9UKG4 626 aa13.56□□□□□ -0.24
CD9-210ENST00000543916 FASNP49327 2511 aaKnown RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 TMED7-TICAM2A0A0A6YYA0 188 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 A0A1W2PNR3 127 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 TMEM72A0PK05 275 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 CXCL13O43927 109 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 TGM6O95932 706 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 HSD17B1P14061 328 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 GGT1P19440 569 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 TCN1P20061 433 aaPredicted RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 CCNA2P20248 432 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 TNFRSF1BP20333 461 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 HTR1EP28566 365 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 HTR3AP46098 478 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 EIF1AXP47813 144 aaKnown RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 RPS3AP61247 264 aaKnown RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 COPZ1P61923 177 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 CDSNQ15517 529 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 SAMD4BQ5PRF9 694 aaKnown RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 HBMQ6B0K9 141 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 ESPNLQ6ZVH7 1005 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 CHMP1BQ7LBR1 199 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 RBM45Q8IUH3 476 aaKnown RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 NAXEQ8NCW5 288 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 OR6T1Q8NGN1 323 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 OR10Q1Q8NGQ4 319 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 VANGL1Q8TAA9 524 aaPredicted RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 RASSF5Q8WWW0 418 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 RND1Q92730 232 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 OR11A1Q9GZK7 315 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 EVA1AQ9H8M9 152 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 PRDM4Q9UKN5 801 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 RNF6Q9Y252 685 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 TMED7Q9Y3B3 224 aa13.55□□□□□ -0.24
CD9-210ENST00000543916 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
CD9-210ENST00000543916 MYO7BQ6PIF6 2116 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms