RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 SMAD9O15198 467 aaKnown RBP11.64□□□□□ -0.55
RTN3-213ENST00000543552 H6PDO95479 791 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 LY6G6DO95868 133 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 DHRS4L1P0CG22 281 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 TFPIP10646 304 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 UQCRBP14927 111 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 HTR3AP46098 478 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 CLK1P49759 484 aaKnown RBP11.64□□□□□ -0.55
RTN3-213ENST00000543552 PPP2R2BQ00005 443 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 CASP8Q14790 479 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 PDK3Q15120 406 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 FAM174BQ3ZCQ3 159 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 GPAT3Q53EU6 434 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 SPANXN4Q5MJ08 99 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 NCMAPQ5T1S8 102 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 AP1ARQ63HQ0 302 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 TYW3Q6IPR3 259 aaKnown RBP11.64□□□□□ -0.55
RTN3-213ENST00000543552 OGFOD2Q6N063 350 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 TMPPEQ6ZT21 453 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 P2RY8Q86VZ1 359 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 CMIPQ8IY22 773 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 CLEC4FQ8N1N0 589 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 ARFGAP2Q8N6H7 521 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 FAM71CQ8NEG0 241 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 PIGXQ8TBF5 258 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 CCDC115Q96NT0 180 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 ZBTB18Q99592 522 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 SLC35A5Q9BS91 424 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 SAP130Q9H0E3 1048 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 QRSL1Q9H0R6 528 aaKnown RBP11.64□□□□□ -0.55
RTN3-213ENST00000543552 MEAF6Q9HAF1 191 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.64□□□□□ -0.55
RTN3-213ENST00000543552 FAIMQ9NVQ4 179 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 CHRNA9Q9UGM1 479 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 BTNL2Q9UIR0 455 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 KCNE5Q9UJ90 142 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 LAMP3Q9UQV4 416 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 HDGFL3Q9Y3E1 203 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 ZANQ9Y493 2812 aa11.64□□□□□ -0.55
RTN3-213ENST00000543552 TLN2Q9Y4G6 2542 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 HIVEP2P31629 2446 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 IGKV3D-15A0A087WSY6 115 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 TRIM64A6NGJ6 449 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 TRIM64BA6NI03 449 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 SCN2BO60939 215 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 PMS2P2O95744 297 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 PLAUP00749 431 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 GGT1P19440 569 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 COX5AP20674 150 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 BGNP21810 368 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 PGM1P36871 562 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 PPA1Q15181 289 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 TSC22D1Q15714 1073 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 STK11Q15831 433 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 TIMM23BQ5SRD1 257 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 CEP85LQ5SZL2 805 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 HHATQ5VTY9 493 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 ABLIM2Q6H8Q1 611 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 SPATA19Q7Z5L4 167 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 MTDHQ86UE4 582 aaKnown RBP11.63□□□□□ -0.55
RTN3-213ENST00000543552 RAB3IL1Q8TBN0 382 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 PIWIL2Q8TC59 973 aaKnown RBP11.63□□□□□ -0.55
RTN3-213ENST00000543552 PMM1Q92871 262 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 RAB8BQ92930 207 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 GTPBP3Q969Y2 492 aaKnown RBP11.63□□□□□ -0.55
RTN3-213ENST00000543552 RADILQ96JH8 1075 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 TRNT1Q96Q11 434 aaKnown RBP11.63□□□□□ -0.55
RTN3-213ENST00000543552 PANX1Q96RD7 426 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 SORT1Q99523 831 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
RTN3-213ENST00000543552 CCDC106Q9BWC9 280 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.63□□□□□ -0.55
RTN3-213ENST00000543552 V9GYY5 206 aaPredicted RBP11.63□□□□□ -0.55
RTN3-213ENST00000543552 HEATR5AQ86XA9 2040 aa11.63□□□□□ -0.55
RTN3-213ENST00000543552 CENPVL1A0A0U1RR11 272 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 A0A1W2PP18 115 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 TRPC5OSA6NMA1 111 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 ZNF814B7Z6K7 855 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 LYZL6O75951 148 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 RYKP34925 604 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 MAGEA8P43361 318 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 MAP2K6P52564 334 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 CASP9P55211 416 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 KCNJ10P78508 379 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 MAPK14Q16539 360 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 ZNF672Q499Z4 452 aaPredicted RBP11.62□□□□□ -0.55
RTN3-213ENST00000543552 FRRS1Q6ZNA5 592 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 UBE2J2Q8N2K1 259 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 CIARTQ8N365 385 aaPredicted RBP11.62□□□□□ -0.55
RTN3-213ENST00000543552 GLB1L3Q8NCI6 653 aaPredicted RBP11.62□□□□□ -0.55
RTN3-213ENST00000543552 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
RTN3-213ENST00000543552 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 DDIT4LQ96D03 193 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 ZNF300Q96RE9 604 aaPredicted RBP11.62□□□□□ -0.55
RTN3-213ENST00000543552 PARD6BQ9BYG5 372 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 C20orf27Q9GZN8 174 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 ALG2Q9H553 416 aa11.62□□□□□ -0.55
RTN3-213ENST00000543552 CTPS2Q9NRF8 586 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms